Data Reduction, Analysis and Modeling pp.619-680

数据缩减、分析和建模，第 619-680 页

• 批准号: 9405021
• 负责人: THOMAS C IRVING
• 金额: $ 15.21万
• 依托单位: ILLINOIS INSTITUTE OF TECHNOLOGY
• 依托单位国家: 美国
• 资助国家: 美国
• 起止时间: 至
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/9405021
• 关键词: Address; Alzheimer' s Disease; Arthritis; Automobile Driving; Biocompatible Materials; Biomedical Research; Biophysics; Biotechnology; Collaborations; Communities; Complex; Consumption; Crystallography; Data; Data Analyses; Data Set; Development; Disease; Ensure; Equilibrium; Fiber; Future; Heart Diseases; Heterogeneity; Image; Investments; Laboratories; Left; Machine Learning; Mainstreaming; Malignant Neoplasms; Mechanics; Methods; Microscopy; Modality; Modeling; Molecular Conformation; Molecular Sieve Chromatography; Motivation; Muscle; Muscle function; Neurodegenerative Disorders; Pattern; Phase; Photons; Refractive Indices; Research; Resolution; Resources; Retinitis Pigmentosa; Roentgen Rays; Sampling; Scanning; Services; Software Tools; Source; Speed; Sushi Domain; System; Techniques; Technology; Time; Training Activity; Vision; X ray diffraction analysis; beamline; crystallinity; data acquisition; data management; data reduction; design; detector; driving force; experimental study; imaging capabilities; instrument; instrumentation; lens; light scattering; macromolecule; medical specialties; millisecond; molecular modeling; multi-scale modeling; multimodality; neglect; nephelometry; novel; operation; programs; protein misfolding; simulation; single molecule; structural biology; synchrotron radiation; technology research and development; tool; user-friendly

The BioCAT Biotechnology Research Resource operates X-ray beamline 18ID at the Advanced Photon Source, Argonne National Laboratory. Now in its 20th year of operation, it is a mature, productive facility with many capabilities unique in the USA, and, arguably, the world. Going forward, we intend to maintain our world- class capabilities in static, time- and spatially-resolved fiber diffraction with beamline enhancements for increased flux and beam quality. A novel high speed, high sensitivity, high spatial resolution pixel array detector will provide an excellent match to the needs of our muscle diffraction program. Also proposed is a versatile micro-diffraction/micro-SAXS instrument that can use one of two Compound Refractive Lenses optimized for either wide- or small-angle fiber crystallography, and continuous flow SAXS experiments. We will implement multimodal scanning micro-diffraction, x-ray florescence microscopy, phase contrast and uv/visible imaging that can be done either singly or in combination with the same instrument on the same samples. Developments in time-resolved SAXS will extend available time regimes from 500 ns to seconds with major reductions in sample consumption, by more than order of magnitude, from current capabilities. This will allow a much wider range of biomedical problems to be addressed than previously possible. A new beamline data acquisition and control system will provide a common interface and better data management for all experiments and advanced support for time resolved experiments. Combined refractive index, dynamic light scattering and multi-angle light scattering measurements with SAXS will offer more comprehensive sample characterization on-line for more robust results. A multi-scale modeling effort will allow extracting more information from muscle X-ray diffraction studies. The proposed developments in multi-scale simulations for interpreting single molecule SAXS data will profoundly benefit studies of multicomponent systems that show considerable conformational heterogeneity. Our relationship with the CCP-SAS project will enable us to widely disseminate the advanced modeling tools we create to not only all our DBP's, collaborative and service users but to the wider biomedical community. Our Driving Biomedical Projects, collaborative, and service projects have relevance to basic mechanisms of muscle function, heart disease, retinitis pigmentosa, cancer and neuro-degenerative diseases. Our proposed training activities are designed to ensure safe, efficient and productive use of the resource by our users. Our proposed dissemination activities are designed to grow our user community by keeping targeted biomedical communities well-informed of resource capabilities.

BioCAT生物技术研究资源在Advanced Photon上操作X射线束线18 ID 来源：阿贡国家实验室。现在，在其第20个年头的运作，这是一个成熟的，生产设施， 许多能力在美国是独一无二的，可以说，在世界上也是独一无二的。展望未来，我们打算维持我们的世界- 在静态、时间和空间分辨光纤衍射方面具有一流的能力， 增加通量和光束质量。一种新型高速、高灵敏度、高空间分辨率像素阵列 探测器将提供一个很好的匹配我们的肌肉衍射计划的需要。还提出了一种 多功能微衍射/微SAXS仪器，可使用两种复合折射透镜之一 针对广角或小角纤维晶体学和连续流SAXS实验进行了优化。我们将 实现多峰扫描微衍射、X射线荧光显微术、相差和UV/可见光 成像可以单独进行，也可以与相同的仪器组合在相同的样品上进行。 时间分辨SAXS的发展将把可用的时间范围从500 ns扩展到几秒， 与现有能力相比，样品消耗量减少了一个数量级以上。这将允许 比以前可能解决的生物医学问题范围更广。一种新的光束线数据 采集和控制系统将提供一个共同的接口和更好的数据管理， 实验和先进的支持时间分辨实验。综合折射率，动态光 SAXS的多角度光散射测量将提供更全面的样品 在线表征以获得更稳健的结果。多尺度建模工作将允许提取更多 来自肌肉X射线衍射研究的信息。多尺度模拟的发展建议， 解释单分子SAXS数据将大大有利于多组分体系的研究， 相当大的构象异质性。我们与CCP-SAS项目的关系将使我们能够广泛地 传播先进的建模工具，我们创造的不仅是我们所有的DBP的，合作和服务用户 更广泛的生物医学界。我们的驱动生物医学项目、协作和服务项目 与肌肉功能、心脏病、色素性视网膜炎、癌症和 神经退行性疾病我们建议的培训活动旨在确保安全、高效和 我们的用户对资源的有效利用。我们建议的传播活动旨在促进我们的 通过使目标生物医学界充分了解资源能力，加强对用户社区的支持。