Effects of pest and pet animal microbiota on child microbiota and asthma: a one health study



 DESCRIPTION (provided by applicant): Candidate Meghan F. Davis, DVM MPH PhD, aspires to an independent, NIH-funded research career evaluating the impacts of microbial exposures of animal origin on health effects in people. For her proposed SERCA K01 award, she first will investigate the contributions of animal bacteria to child bacteria (aim 1), and then link bacterial dysbiosis to exacerbations of disease among inner-city urban children with existing asthma (aim 2) along the following pathway: pest and pet microbiota->child microbiota->child respiratory health. She also will test her hypothesis that individual pathogens also drive asthma morbidity by evaluating S. aureus, a leading candidate bacterium known to worsen atopic eczema through allergic mechanisms, and by establishing a biospecimen repository to investigate other candidate pathogens through future research efforts. Asthma affects almost seven million children in the United States, and this work is positioned to identify novel and modifiable bacterial drivers of morbidity particularly relevant to low-income urban children with asthma, a population with a disproportionate burden of disease. For Dr. Davis, this work and attendant career development program also will provide critical training in human clinical research, bacterial sequencing and big data analysis, and protected time to establish a high-quality independent research program and grow a scientific reputation through grants, publications, and presentations. Primary mentor Dr. Elizabeth Matsui, Associate Professor at the Johns Hopkins School of Medicine (JHSOM), is an allergist and clinical epidemiologist with an outstanding track record of mentorship of K-grant awardees and NIH-sponsored research on the environmental determinants of respiratory disease. Dr. Meredith McCormack, Assistant Professor at JHSOM, provides complementary expertise in the target disease of asthma. Other scientific advisory committee members will assist with microbiome and whole genome sequencing techniques (Drs. Marsha Wills-Karp and Karen Carroll, with external mentor Dr. Elizabeth Grice at the University of Pennsylvania), bioinformatics data processing (Drs. Grice and Kasper Hansen), and statistical analysis resources and training (Drs. Hansen and Roger Peng). This multidisciplinary team also will support Dr. Davis' faculty development and leadership in a one health context and expand her collaborative efforts with faculty in Comparative Medicine (Drs. Wills-Karp, Carroll and Kathleen Gabrielson). Taken as a whole, this research and training platform will position Dr. Davis to succeed as an independent researcher and Assistant Professor in the Department of Environmental Health Sciences at Johns Hopkins Bloomberg School of Public Health. This supportive institutional environment includes a state-of-the-art genomics core facility, computing and data resources, and an exceptional clinical research program through the School of Medicine. The Johns Hopkins environment also provides access to prominent investigators in pulmonary medicine, allergy and immunology, comparative medicine, and biostatistics. Through a SERCA K01 award, Dr. Meghan Davis will synergize her veterinary clinical background and PhD training in exposure assessment with new skills in bioinformatics, clinical epidemiology and human asthma, emerging as an independent researcher and expert on the human respiratory health effects related to complex microbial exposures of animal origin.