Elucidating the Role of Perivascular Niche in Glioblastoma Invasion and Therapeutic Resistance at Single Cell Resolution using Biomimetic Tumor Microenvironment Models

使用仿生肿瘤微环境模型以单细胞分辨率阐明血管周围微环境在胶质母细胞瘤侵袭和治疗耐药中的作用

• 批准号: 10665738
• 负责人: Mehdi Nikkhah
• 金额: $ 37.72万
• 依托单位: ARIZONA STATE UNIVERSITY-TEMPE CAMPUS
• 依托单位国家: 美国
• 财政年份: 2021
• 资助国家: 美国
• 起止时间: 2021-09-15 至 2026-07-31
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10665738
• 关键词: 3-Dimensional; Address; Affect; Architecture; Astrocytes; Behavior; Bioinformatics; Biological; Biological Assay; Biological Models; Biology; Biomedical Engineering; Biomimetics; Blood Vessels; Blood capillaries; CXCR; CXCR4 gene; Cell Communication; Cell Maintenance; Cells; Complex; Cultured Cells; Data; Development; Disease; Disease Progression; Dose; Endothelial Cells; Engineering; Excision; Exposure to; Genetic; Genomics; Glioblastoma; Glioma; Goals; Homing; Human; Hypoxia; Immune; In Vitro; Individual; Interruption; Invaded; Knowledge; Ligands; Mediating; Methods; Microfluidic Microchips; Microfluidics; Microglia; Modeling; Molecular; Oncology; Operative Surgical Procedures; Organoids; Pathway interactions; Patients; Pericytes; Physiological; Positioning Attribute; Prediction of Response to Therapy; Proliferating; Property; Radiation; Radiation therapy; Recurrent tumor; Research Design; Resistance; Resolution; Role; Sampling; Shelter facility; Site; Slice; Specificity; Stromal Cell-Derived Factor 1; Time; Tissue Engineering; Tissues; Tumor Tissue; Tumorigenicity; Validation; cell behavior; cell type; chemotherapeutic agent; conventional therapy; endothelial stem cell; genotoxicity; in vivo; in vivo Model; insight; interdisciplinary approach; irradiation; mouse model; multidisciplinary; neoplastic cell; novel; pharmacologic; radiation resistance; receptor; response; self-renewal; single-cell RNA sequencing; small hairpin RNA; stem; stem cell biology; stem cell proliferation; stem cells; stemness; targeted treatment; therapy resistant; three dimensional cell culture; three-dimensional modeling; transcriptome sequencing; transcriptomics; treatment response; tumor; tumor microenvironment

Summary One of the critical challenges in the treatment of Glioblastoma (GBM) is the presence of highly resistant cells with stem-like properties, called glioma stem cells (GSCs), that evade surgical resection, resist conventional treatments and are primarily responsible for tumor recurrence. The perivascular niche within the GBM tumor microenvironment (TME) has been well recognized as a critical site that shelters GSCs and promotes their stemness, invasion, and therapeutic resistance. Extensive studies from others and our lab, using in vitro and in vivo models, have demonstrated that the crosstalk between the endothelial cells (ECs) and GSCs regulates GSC proliferation, tumorigenicity and self- renewal capacity. However, the perivascular niche is a complex microenvironment comprised not only of ECs but multiple other cell types including astrocytes, pericytes, and immune cells. How the cell-cell interactions between the various cellular components of the perivascular niche modulate GSC behavior (proliferation vs. quiescence and invasion vs. homing) and therapy resistance is poorly understood. To address these unmet biological knowledge gaps, there is a critical need for sophisticated and more realistic ex vivo tumor models that better recapitulate the physiological complexities of the GBM perivascular niche to advance our fundamental understanding of the biology of the disease and predict therapeutic responses. Recently, we have established and validated an on-chip microfluidic tumor model of GBM, with a unique 3D organotypic architecture, to study the influence of the perivascular niche on GSC invasion. We have shown that co-culturing of astrocytes enhances EC-induced invasion of GSCs, where RNA-seq analysis of mono-culture vs. tri-culture provided a mechanistic insight into the receptor-ligand pairs that mediate the interactions between cells. Based on these foundational developments, in this study our goal is to develop an ex vivo tumor model of GBM, bioinspired from the native perivascular niche, with patient-derived cells to dissect the role of cellular components within the niche on GSC biology and response to treatment at single cell resolution. In Aim 1, our objective is to determine the influence of the key cell types within the perivascular niche on GSC-EC interactions. In Aim 2, we plan to mechanistically unveil the impact of radiation treatment on GSCs- perivascular niche interactions, while in Aim 3, we will blunt invasion and sensitize GSCs through disruption of niche-tumor cell interactions. Our study design uniquely employs an interdisciplinary approach including microengineering of a bioinspired ex vivo tumor model, single-cell level resolution analysis, molecular-level transcriptomics, and validation using ex vivo patient tumor samples. Successful completion of these studies will not only further our understanding of the interactions of GSCs with the perivascular niche but will also facilitate identification of novel targets to block disease progression.

总结

项目成果

Systematic integration of protein-affecting mutations, gene fusions, and copy number alterations into a comprehensive somatic mutational profile.

• DOI: 10.1016/j.crmeth.2023.100442
• 发表时间: 2023-04-24
• 期刊: Cell reports methods

Revealing the biology behind MRI signatures in high grade glioma.

揭示高级别神经胶质瘤 MRI 特征背后的生物学。

• DOI: 10.1101/2023.12.08.23299733
• 发表时间: 2023
• 期刊: medRxiv : the preprint server for health sciences
• 作者: Lewis,ErikaM;Mao,Lingchao;Wang,Lujia;Swanson,KristinR;Barajas,RamonF;Li,Jing;Tran,NhanL;Hu,LelandS;Plaisier,ChristopherL
• 通讯作者: Plaisier,ChristopherL