Label-free digital cytopathology using deep-ultraviolet coded ptychography with intrinsic molecular contrast

使用具有内在分子对比的深紫外编码叠层描记术进行无标记数字细胞病理学

• 批准号: 10718442
• 负责人: Guoan Zheng
• 金额: $ 36.3万
• 依托单位: UNIVERSITY OF CONNECTICUT STORRS
• 依托单位国家: 美国
• 财政年份: 2023
• 资助国家: 美国
• 起止时间: 2023-07-01 至 2027-06-30
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10718442
• 关键词: Address; Adjuvant Therapy; Amino Acids; Anatomy; Area; Biopsy; Brain Neoplasms; Brightfield Microscopy; Cell Nucleus; Cells; Chemicals; Code; Critical Care; Cytology; Cytopathology; Cytoplasm; Data; Devices; Diagnosis; Disease; Dyes; Elements; Engineering; Evaluation; Excision; Fine needle aspiration biopsy; Fluorescence; Glass; Health; Histologic; Histology; Histopathology; Hospitals; Hour; Image; Imaging Device; Individual; Intervention; Label; Laboratories; Lighting; Lung; Maps; Measurement; Measures; Medicine; Methods; Microscope; Modeling; Modern Medicine; Molecular; Morphology; Mus; Nucleic Acids; Operative Surgical Procedures; Optics; Pathologist; Pathology; Patients; Performance; Phase; Preparation; Process; Proteins; Quartz; Research Personnel; Resolution; Sampling; Signal Transduction; Site; Skin Neoplasms; Slide; Specificity; Specimen; Spectrum Analysis; Stains; Surgical Oncology; Surgical margins; System; Thick; Time; Tissue Sample; Tissues; Ultraviolet Rays; Validation; Variant; Visible Radiation; Work; absorption; biological research; cancer imaging; code development; cost; data acquisition; deep neural network; diffraction of light; digital; fluorescence microscope; histopathological examination; immunopathology; lens; meter; prototype; sensor; success; tool; tool development; transmission process; tumor; ultraviolet; virtual

Project Summary / Abstract Histopathological examination of tissue is a pillar of modern medicine and biological research. Commonly used bright-field microscopy requires prior preparation of micrometer-thick tissue sections mounted on glass slides and stained with dyes, a process that takes hours or days, delaying access to critical information for interventions. This project aims to develop a new type of high-throughput digital cytopathology tool with intrinsic molecular contrast for label-free and slide-free histology. This tool will be built based on lensless high-throughput coded ptychography operated at the 260-nm and 280-nm deep ultraviolet (DUV) wavelengths. DUV light directly interacts with and is absorbed by biomolecules of nucleic acids (nucleus) and amino acids (protein) of cells. Absorption spectra are different for these two types of biomolecules. By measuring the specimen profiles at the 260-nm and 280-nm DUV wavelengths, we can recover the quantitative mass maps of cell nucleus and protein without any dye labeling. In contrast, there is no absorption for these biomolecules in the visible light regime. In the proposed DUV coded ptychography tool, we do not use any optical lens as in a conventional microscope platform. Instead, we fabricate a disorder-engineered coded layer on top of an image sensor. This coded layer serves as a large-scale scattering ‘lens’ for imaging specimens placed on top of it. When light diffracts from the tissue samples at a large angle, the coded layer redirects the diffracted light into smaller angles that are detectable by sensor pixels. As such, the otherwise inaccessible high-resolution object details can be acquired using the pixel array underneath the coded layer. Our preliminary data show that the image throughput is greater than the fastest whole slide scanner in the world: resolving 308-nm linewidth over a 240-mm2 effective field of view in 15 seconds. By using the dual wavelength DUV LEDs for sample illumination, the proposed tool will provide both phase-based quantitative morphology measurement and amplitude-based intrinsic chemical specificities for different biomolecules. It can be used for rapid onsite evaluation of cytology smear obtained from fine-needle aspirate. It can also reduce sample preparation time and provides intraoperative pathology guidance on surgical margins. The cost of the entire device will be similar to that of an iPad, making it a handheld, high-throughput ‘personal’ whole slide scanner for most individual pathologists and researchers worldwide.

项目总结/摘要 组织的组织学检查是现代医学和生物学研究的支柱。通常 使用的明视野显微镜需要预先制备微米厚的组织切片， 幻灯片和染色，这一过程需要数小时或数天，延迟访问关键信息， 干预措施。本项目旨在开发一种新型的高通量数字化细胞病理学工具， 用于无标记和无载玻片组织学的内在分子对比度。这款工具将基于无透镜 在260 nm和280 nm深紫外（DUV）下操作的高通量编码重叠关联成像 波长DUV光直接与核酸的生物分子（细胞核）相互作用并被其吸收， 细胞的氨基酸（蛋白质）。这两种类型的生物分子的吸收光谱是不同的。通过 在260-nm和280-nm DUV波长下测量样品轮廓，我们可以恢复 没有任何染料标记的细胞核和蛋白质的定量质量图。相比之下， 这些生物分子在可见光区的吸收。 在所提出的DUV编码重叠关联成像工具中，我们不使用任何光学透镜，如在传统的重叠关联成像工具中那样。 显微镜平台相反，我们在图像传感器上制造了一个无序工程编码层。 该编码层用作大尺度散射“透镜”，用于对放置在其上的样本进行成像。 当光以大角度从组织样本衍射时，编码层将衍射光重定向到 传感器像素可检测到的较小角度。因此，其他无法获得的高分辨率 可以使用编码层下面的像素阵列来获取对象细节。我们的初步数据显示 图像吞吐量大于世界上最快的全切片扫描仪：分辨率为308 nm 线宽超过240平方毫米的有效视野在15秒。通过使用双波长DUV LED， 样品照明，建议的工具将提供基于相位的定量形态测量 以及不同生物分子的基于振幅的固有化学特异性。可用于快速现场 细针穿刺细胞学涂片的评价。它还可以减少样品制备时间 并提供手术切缘的术中病理学指导。整个设备的成本将是 类似于iPad，使其成为大多数人的手持，高通量的“个人”全载玻片扫描仪 世界各地的病理学家和研究人员