Understanding and targeting the Methionine-Aromatic motif in oxidized alpha-Synuclein

了解和靶向氧化 α-突触核蛋白中的甲硫氨酸-芳香族基序

• 批准号: 9791033
• 负责人: Jonathan N Sachs
• 金额: $ 17.64万
• 依托单位: UNIVERSITY OF MINNESOTA
• 依托单位国家: 美国
• 财政年份: 2018
• 资助国家: 美国
• 起止时间: 2018-09-27 至 2021-06-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/9791033
• 关键词: Amino Acids; Aromatic Amino Acids; Aromatic Compounds; Biological Assay; Biology; Biophysics; Biosensor; C-terminal; Calmodulin; Cell Death; Cells; Chemicals; Chemistry; Clinic; Collaborations; Communication; Computer Simulation; Computers; Coupled; Data; Detection; Disease; Dopamine; Engineering; Enzymes; Fluorescence; Fluorescence Resonance Energy Transfer; Future; Genetic Transcription; Goals; Interruption; Knowledge; Lead; Letters; Libraries; Ligand Binding; Ligands; Literature; Measurement; Mediating; Methionine; Methods; Modification; Molecular; Monitor; Nature; Nerve Degeneration; Neurons; Neurosciences; Oxidative Stress; Oxides; Paper; Parkinson Disease; Pharmaceutical Chemistry; Pharmaceutical Preparations; Play; Process; Protein Conformation; Proteins; Protocols documentation; Publishing; Reagent; Recombinant Proteins; Recording of previous events; Research; Role; Sampling; Series; Side; Stretching; Structure; Sulfoxide; Tertiary Protein Structure; Testing; Thermodynamics; Time; Toxic effect; Tumor Necrosis Factor Receptor; Tyrosine; Work; alpha synuclein; amyloid formation; base; driving force; drug discovery; effective therapy; efficacy testing; experimental study; fighting; high throughput screening; inhibitor/antagonist; insight; methionine sulfoxide; molecular dynamics; monomer; neurotoxic; new therapeutic target; novel; novel therapeutics; oxidation; prevent; protein folding; screening; simulation; small molecule; small molecule inhibitor; targeted treatment; tool

ABSTRACT A distinct feature of Parkinson’s Disease (PD) is the aggregation of neurotoxic α-Synuclein (αSyn) into amyloid assemblies. Despite over two decades of intense efforts to identify inhibitors that directly interrupt the αSyn aggregation process, no successful compounds have reached the clinic. Research on the molecular basis of PD has recently undergone a dramatic shift to focus on toxic oligomeric αSyn and its relation to neurodegeneration. Understanding this promising new therapeutic target, a departure from research on insoluble fibrils, now requires biophysical insight about the misfolding of αSyn monomers into the toxic oligomeric forms of the protein. Several recent studies have pointed to oxidative stress conditions as leading to the formation of highly toxic αSyn oligomers. Thus, our first goal is to understand the molecular basis for misfolding of oxidized αSyn. We will build on several high-impact discoveries made in the past two years that highlighted the importance of C-terminal tyrosine residues in the misfolding process. We will test a straightforward hypothesis that is based on our own recent discovery (published in Nature Chemical Biology in 2016), namely that oxidation of methionine leads to the formation of a strong non-covalent interaction with aromatic residues, including tyrosine. Our approach will provide quantitative details of the chemistry and biophysics of αSyn, including state- of-the-art NMR measurements and computational modeling. Second, we will discover a novel set of small molecules that, for the first time, target the formation and stability of toxic, oxidized αSyn oligomers. We will take advantage of a powerful new platform for high-throughput screening that is based on exquisitely sensitive fluorescence lifetime measurements, and test the functional efficacy of Hit compounds in neurons. These small molecules will ultimately provide a platform for our groups, in future R01-scale proposals, to launch a full-scale medicinal chemistry drug discovery campaign; but in this proposal, the Hit compounds will serve as probes to further determine (by NMR) which specific side-chain interactions with oxidized methionine drive misfolding of αSyn. !

摘要 帕金森病(PD)的一个显著特征是神经毒性α-突触核蛋白(α-Syn)聚集成淀粉样蛋白 装配。尽管二十多年来一直在努力寻找直接干扰α系统的抑制剂 在聚集过程中，还没有成功的化合物到达临床。帕金森病的分子基础研究 最近经历了戏剧性的转变，将重点放在有毒寡聚αSyn及其与 神经退行性变。了解这一有希望的新治疗靶点，背离了对不溶性药物的研究 纤维，现在需要对αSyn单体错误折叠成有毒寡聚形式的生物物理了解 蛋白质的含量。最近的几项研究指出，氧化应激条件导致了 剧毒的αSYN齐聚物。因此，我们的第一个目标是了解错误折叠的分子基础。 氧化型α同步。我们将在过去两年中取得的几项高影响力发现的基础上，突出 C末端酪氨酸残基在错误折叠过程中的重要性。我们将检验一个简单的假设 这是基于我们最近的发现(2016年发表在《自然化学生物学》上)，即氧化 甲硫氨酸导致与芳香族残基形成强烈的非共价相互作用，包括 酪氨酸。我们的方法将提供αSYN的化学和生物物理的定量细节，包括状态- 最先进的核磁共振测量和计算模型。第二，我们将发现一组新奇的小 首次针对有毒、氧化的αSYN低聚物的形成和稳定性的分子。我们 将利用功能强大的新平台进行高通量筛选，该平台基于 灵敏的荧光寿命测量，并测试HIT化合物在神经元中的功能功效。 这些小分子最终将为我们的团队提供一个平台，在未来的R01规模提案中推出 一场全面的药物化学药物发现活动；但在这项提案中，热门化合物将作为 进一步确定(通过核磁共振)哪些特定侧链与氧化蛋氨酸驱动相互作用的探针 α系统的错误折叠。 好了！