Mechanism-based strategies to target oncogenic BRAF signaling

针对致癌 BRAF 信号传导的基于机制的策略

• 批准号: 10053708
• 负责人: Poulikos I Poulikakos
• 金额: $ 38.79万
• 依托单位: ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI
• 依托单位国家: 美国
• 财政年份: 2016
• 资助国家: 美国
• 起止时间: 2016-12-08 至 2022-11-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/10053708
• 关键词: Allosteric Regulation; Ally; Area; BRAF gene; Binding; Biochemical; Biological Assay; Cell Line; Cells; Clinical; Colorectal; Complex; Data; Development; Dimerization; Drug Design; Drug Side Effects; Drug resistance; Effectiveness; Event; Goals; Human; In complete remission; Investigation; Knowledge; Link; MEKs; Mediating; Modeling; Molecular Conformation; Multi-Drug Resistance; Mutate; Mutation; Normal Cell; Oncogenic; Outcome; Patients; Pharmaceutical Preparations; Pharmacology; Property; Proto-Oncogene Proteins B-raf; Protomer; Ras/Raf; Recovery; Regulation; Reporting; Resistance; Resistance development; Signal Transduction; Site; Structure; Testing; Therapeutic; Thyroid Gland; Time; Work; Xenograft procedure; acquired drug resistance; base; biophysical techniques; cell growth; clinical development; clinical efficacy; comparative efficacy; design; dimer; effective therapy; experimental study; improved; in vivo; inhibitor/antagonist; insight; melanoma; mutant; next generation; preclinical development; resistance mechanism; response; side effect; small molecule inhibitor; targeted treatment; therapeutically effective; tumor

Abstract BRAF kinase is frequently found mutated in human tumors and in the majority of melanomas. RAF inhibitors vemurafenib and dabrafenib improved survival of melanoma patients with BRAF(V600E) tumors. Unfortunate- ly, responses are usually temporary, followed by development of resistance, most commonly due to ineffective inhibition of RAF and reactivation of ERK signaling in the presence of the drug. In addition, RAF inhibitors in- duce second site tumors, due to RAS-dependent paradoxical activation of RAF and downstream ERK signaling in normal cells. Outside of melanoma, RAF inhibitors showed limited efficacy in patients colorectal and thyroid BRAF(V600E) tumors, also due to ineffective inhibition of RAF/ERK signaling in these tumors. More recently, combinations of RAF and MEK inhibitors showed improved efficacy compared to RAF inhibitor monotherapy, but resistance eventually emerges as well. Resistance mechanisms identified to the RAF/MEK inhibitor combi- nation are similar to the ones identified for RAF inhibitor monotherapy, suggesting that ineffective inhibition of RAF is a critical limiting factor in both contexts. There is thus a pressing need for improved therapeutic strate- gies targeting oncogenic BRAF, such that durable responses and minimal side effects can be achieved. Our previous work showed that regulation of BRAF kinase by dimerization determines both the development of re- sistance to currently used RAF inhibitors and inhibitor-induced RAF paradoxical activation, but the underlying mechanisms remain incompletely understood. Recently, next generation RAF inhibitors with different structural and biochemical properties have entered preclinical and clinical development, but the most appropriate clinical context for their use is unknown. The goal of this proposal is to accomplish a detailed understanding of the mechanisms governing the targeting of oncogenic BRAF by small molecules inhibitors and to use this knowledge in order to design more effective RAF inhibitor-based therapeutic strategies. More specifically, we will 1) characterize the mechanistic basis of resistance to RAF inhibitors due to BRAF dimerization by linking the conformational changes induced by inhibitor binding to BRAF to the biochemical effects of the inhibitor, 2) gain a detailed understanding of the biochemical mechanism of paradoxical RAF activation by inhibitors in cells with wild-type BRAF and 3) identify effective RAF inhibitor-based therapeutic strategies for tumors with dimeric BRAF that would overcome RAF dimer-mediated intrinsic or acquired resistance to RAF inhibitors. The mech- anistic insights gained by the proposed experiments will enable the rational design of more effective small mol- ecule inhibitors and RAF inhibitor-based therapeutic strategies targeting oncogenic BRAF signaling, with mini- mal side effects and prolonged time to resistance.

摘要 BRAF激酶在人类肿瘤和大多数黑色素瘤中经常发现突变。RAF抑制剂 维莫拉非尼和达普拉非尼提高了患有BRAF(V600E)肿瘤的黑色素瘤患者的存活率。不幸的是- LY，反应通常是暂时的，其次是抗药性的发展，最常见的原因是无效 在药物存在的情况下，抑制RAF和重新激活ERK信号。此外，RAF抑制剂在- Ras依赖的RAF和下游ERK信号的矛盾激活所致的Duce第二部位肿瘤 在正常细胞中。除黑色素瘤外，RAF抑制剂对结直肠癌和甲状腺患者的疗效有限。 BRAF(V600E)肿瘤，也是由于在这些肿瘤中抑制RAF/ERK信号无效。最近， 与RAF抑制剂单一治疗相比，RAF和MEK抑制剂的联合治疗显示出更好的疗效。 但阻力最终也会出现。对RAF/MEK抑制剂联合耐药机制的研究 National类似于RAF抑制剂单一治疗的药物，表明抑制RAF无效 在这两种情况下，皇家空军都是一个关键的限制因素。因此，迫切需要改进治疗策略- 以致癌的BRAF为靶点的GES，因此可以实现持久的反应和最小的副作用。我们的 前人的工作表明，二聚化对BRAF激酶的调节既决定了BRAF-KK的发育，也决定了BRAF-KK的功能。 抵抗目前使用的RAF抑制剂和抑制剂诱导的RAF矛盾激活，但潜在的 机制仍然不完全清楚。近年来，具有不同结构的新一代RAF抑制剂 而生化特性已进入临床前和临床发展阶段，但临床上最合适 它们的使用环境尚不清楚。这项建议的目标是实现对 小分子抑制剂靶向致癌BRAF的机制及其应用 以设计更有效的RAF抑制剂为主的治疗策略。更具体地说，我们 将1)通过连接来表征由于BRAF二聚化而对RAF抑制剂产生抗性的机制基础 抑制剂与BRAF结合引起的构象变化对其生化效应的影响，2) 详细了解细胞内抑制物反常激活RAF的生化机制 与野生型BRAF和3)寻找有效的RAF抑制剂为基础的二聚体肿瘤的治疗策略 BRAF可克服RAF二聚体介导的对RAF抑制剂的固有或获得性耐药。机甲- 通过所提出的实验获得的反常的见解将使更有效的小分子分子的合理设计成为可能。 针对致癌的BRAF信号转导的基于ECULE抑制剂和RAF抑制剂的治疗策略，具有微型 不良反应和耐药时间延长。

项目成果

ROCK1 mechano-signaling dependency of human malignancies driven by TEAD/YAP activation.

• DOI: 10.1038/s41467-022-28319-3
• 发表时间: 2022-02-04
• 期刊: Nature communications
• 影响因子: 16.6
• 作者: Esposito D;Pant I;Shen Y;Qiao RF;Yang X;Bai Y;Jin J;Poulikakos PI;Aaronson SA
• 通讯作者: Aaronson SA

New perspectives for targeting RAF kinase in human cancer.

• DOI: 10.1038/nrc.2017.79
• 发表时间: 2017-11
• 期刊: Nature reviews. Cancer
• 作者: Karoulia Z;Gavathiotis E;Poulikakos PI
• 通讯作者: Poulikakos PI

Mouse ER+/PIK3CAH1047R breast cancers caused by exogenous estrogen are heterogeneously dependent on estrogen and undergo BIM-dependent apoptosis with BH3 and PI3K agents.

由外源雌激素引起的小鼠 ER /PIK3CAH1047R 乳腺癌对雌激素具有异质依赖性，并在 BH3 和 PI3K 药物的作用下经历 BIM 依赖性细胞凋亡。

• DOI: 10.1038/s41388-018-0436-4
• 发表时间: 2019
• 期刊: Oncogene
• 影响因子: 8
• 作者: Stratikopoulos,EliasE;Kiess,Nicole;Szabolcs,Matthias;Pegno,Sarah;Kakit,Cheung;Wu,Xuewei;Poulikakos,PoulikosI;Cheung,Pamela;Schmidt,Hank;Parsons,Ramon
• 通讯作者: Parsons,Ramon

Perspectives in Melanoma: meeting report from the Melanoma Bridge (December 2nd - 4th, 2021, Italy).

• DOI: 10.1186/s12967-022-03592-4
• 发表时间: 2022-09-04
• 期刊: JOURNAL OF TRANSLATIONAL MEDICINE
• 影响因子: 7.4
• 作者: Ascierto, Paolo A.;Agarwala, Sanjiv S.;Blank, Christian;Caraco, Corrado;Carvajal, Richard D.;Ernstoff, Marc S.;Ferrone, Soldano;Fox, Bernard A.;Gajewski, Thomas F.;Garbe, Claus;Grob, Jean-Jacques;Hamid, Omid;Krogsgaard, Michelle;Lo, Roger S.;Lund, Amanda W.;Madonna, Gabriele;Michielin, Olivier;Neyns, Bart;Osman, Iman;Peters, Solange;Poulikakos, Poulikos, I;Quezada, Sergio A.;Reinfeld, Bradley;Zitvogel, Laurence;Puzanov, Igor;Thurin, Magdalena
• 通讯作者: Thurin, Magdalena

Triple MAPK inhibition salvaged a relapsed post-BCMA CAR-T cell therapy multiple myeloma patient with a BRAF V600E subclonal mutation.

• DOI: 10.1186/s13045-022-01330-3
• 发表时间: 2022-08-17
• 期刊: JOURNAL OF HEMATOLOGY & ONCOLOGY
• 影响因子: 28.5
• 作者: Elnaggar, Muhammad;Agte, Sarita;Restrepo, Paula;Ram, Meghana;Melnekoff, David;Adamopoulos, Christos;Stevens, Mark M.;Kappes, Katerina;Leshchenko, Violetta;Verina, Daniel;Jagannath, Sundar;Poulikakos, Poulikos, I;Parekh, Samir;Lagana, Alessandro
• 通讯作者: Lagana, Alessandro