Multi-Omics DACC: The Data Analysis and Coordination Center for the collaborative multi-omics for health and disease initiative
Multi-Omics DACC: The Data Analysis and Coordination Center for the collaborative multi-omics for health and disease initiative
批准号:
10744561
负责人:
Anshul Kundaje
金额:
$311.62万
依托单位国家:
美国
项目类别:
财政年份:
2023
资助国家:
美国
项目状态:
未结题
起止时间:
2023-09-12 至 2025-05-31
关键词:
AgreementBiologicalCatalogingCollaborationsCommunicationCommunitiesCommunity OutreachComputing MethodologiesDataData AnalysesData CollectionData SetDedicationsDiseaseEnsureEnvironmental ExposureFAIR principlesGoalsHealthIntuitionLeadershipLogisticsMachine LearningMetadataMethodsMultiomic DataParticipantPhenotypePopulation HeterogeneityPositioning AttributePostdoctoral FellowProcessProductionProtocols documentationQuality ControlReproducibilityResearchResearch PersonnelResourcesSecureServicesSiteSoftware EngineeringSoftware ToolsSpecific qualifier valueStandardizationStatistical MethodsTechnologyUnited States National Institutes of HealthUpdateVisualizationWorkanalysis pipelinecomputational pipelinesdata analysis pipelinedata harmonizationdata integrationdata modelingdata portaldata qualitydata standardsdata submissiondesignexperiencemeetingsmethod developmentmultidimensional datamultiple omicsnoveloutreachprotocol developmentsocial mediasuccesssymposium
中文摘要
点击翻译按钮获取中文摘要
英文摘要
ABSTRACT
The NIH is establishing a new Multi-Omics for Health and Disease Consortium to advance the application of
multi-omic technologies to study health and disease in ancestrally diverse populations. The Consortium
comprises three components: Disease Study Sites (DSSs), ‘Omics Production Centers (OPCs), and a Data
Analysis and Coordination Center (DACC). The project aims to establish a DACC to coordinate and support
the Consortium’s activities and maximize its success. To be impactful, the Consortium’s experimental protocols
must be transparent and reproducible, data must adhere to the FAIR guiding principles (Findable, Accessible,
Interoperable, Reusable), and computational methods and software tools must be open to the public.
Furthermore, an interactive portal is needed for intuitive access to the data, and dedicated outreach efforts are
required to assist the community in data use. We have assembled a unique team of investigators, data
wranglers, software engineers, bioinformaticians, and postdocs to form a DACC to meet the challenges of
ensuring high data quality and maximizing the consortium’s impact. All five DACC investigators have held
leadership positions in large consortia in the past decade and bring substantial expertise in data coordination,
management, harmonization, analysis, and integration. Our DACC will accomplish the goals of the Consortium
via six specific aims: Aim 1. Coordinating and contributing to Consortium-wide protocol development, data
analysis, and methods development. Aim 2. Managing and securing Consortium data by specifying metadata,
establishing submission processes and standards, and incorporating experimental data and analysis results
into AnVIL. Aim 3. Creating a multi-dimensional dataset that is available to the broader research community.
Aim 4. Designing, developing, and maintaining an open-access portal for cataloging, querying, and visualizing
summary-level data. Aim 5. Coordinating consortium logistics by organizing and facilitating internal and
external activities, communications, and collaborations. Aim 6. Coordinating community outreach and
dissemination of Consortium findings.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
A Comprehensive Genomic Community Resource of Transcriptional Regulation
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批准号:10411262
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项目类别:
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资助金额:$83.35万
-
财政年份:2022
-
负责人:Anshul Kundaje
-
依托单位:
A Comprehensive Genomic Community Resource of Transcriptional Regulation
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批准号:10842047
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项目类别:
-
资助金额:$20.28万
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财政年份:2022
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负责人:Anshul Kundaje
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依托单位:
A Comprehensive Genomic Community Resource of Transcriptional Regulation
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批准号:10625529
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项目类别:
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资助金额:$80.94万
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财政年份:2022
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负责人:Anshul Kundaje
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依托单位:
Identifying causal genetic variants and molecular mechanisms impacting mental health
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批准号:10571911
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项目类别:
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资助金额:$61.6万
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财政年份:2021
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负责人:Anshul Kundaje
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依托单位:
Identifying causal genetic variants and molecular mechanisms impacting mental health
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批准号:10380573
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项目类别:
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资助金额:$61.62万
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财政年份:2021
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负责人:Anshul Kundaje
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依托单位:
Predicting context-specific molecular and phenotypic effects of genetic variation through the lens of the cis-regulatory code
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批准号:10659170
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项目类别:
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资助金额:$72.74万
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财政年份:2021
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负责人:Anshul Kundaje
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依托单位:
Predicting context-specific molecular and phenotypic effects of genetic variation through the lens of the cis-regulatory code
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批准号:10297562
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项目类别:
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资助金额:$35.22万
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财政年份:2021
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负责人:Anshul Kundaje
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依托单位:
Predicting context-specific molecular and phenotypic effects of genetic variation through the lens of the cis-regulatory code
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批准号:10474459
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项目类别:
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资助金额:$72.74万
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财政年份:2021
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负责人:Anshul Kundaje
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依托单位:
Multi-omic functional assessment of novel AD variants using high-throughput and single-cell technologies
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批准号:10684210
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项目类别:
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资助金额:$166.0万
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财政年份:2021
-
负责人:Anshul Kundaje
-
依托单位:
Multi-omic functional assessment of novel AD variants using high-throughput and single-cell technologies
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批准号:10217784
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项目类别:
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资助金额:$169.82万
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财政年份:2021
-
负责人:Anshul Kundaje
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依托单位:
Multi-omic functional assessment of novel AD variants using high-throughput and single-cell technologies
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批准号:10436207
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项目类别:
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资助金额:$166.92万
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财政年份:2021
-
负责人:Anshul Kundaje
-
依托单位:
Identifying causal genetic variants and molecular mechanisms impacting mental health
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批准号:10116649
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项目类别:
-
资助金额:$61.8万
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财政年份:2021
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负责人:Anshul Kundaje
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依托单位:
SOFTWARE FOR LARGE-SCALE INFERENCE OF THE GENETICS OF LIFESTYLE MEASURES, BIOMARKERS, AND COMMON AND RARE DISEASES
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批准号:10440494
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项目类别:
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资助金额:$39.25万
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财政年份:2018
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负责人:Anshul Kundaje
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依托单位:
SOFTWARE FOR LARGE-SCALE INFERENCE OF THE GENETICS OF LIFESTYLE MEASURES, BIOMARKERS, AND COMMON AND RARE DISEASES
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批准号:10251897
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项目类别:
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资助金额:$39.25万
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财政年份:2018
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负责人:Anshul Kundaje
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依托单位:
Deep learning frameworks for regulatory genomics.
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批准号:9169521
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项目类别:
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资助金额:$235.5万
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财政年份:2016
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负责人:Anshul Kundaje
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依托单位:
海外基金