Roles of Lig3 and XRCC1 Genes in Genome Stability

Lig3 和 XRCC1 基因在基因组稳定性中的作用

• 批准号: 7843600
• 负责人: Alan E Tomkinson
• 金额: $ 30.07万
• 依托单位: UNIVERSITY OF MARYLAND BALTIMORE
• 依托单位国家: 美国
• 财政年份: 2004
• 资助国家: 美国
• 起止时间: 2004-04-22 至 2014-02-28
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7843600
• 关键词: Antineoplastic Agents; Apoptosis; Base Excision Repairs; Biological; Cell Cycle Checkpoint; Cell physiology; Cells; Characteristics; Complex; DNA; DNA Damage; DNA Double Strand Break; DNA Ligases; DNA Repair; DNA Repair Pathway; DNA Sequence Rearrangement; DNA Single Strand Break; DNA biosynthesis; DNA lesion; DNA ligase III; DNA strand break; DNA-Directed DNA Polymerase; Defect; Development; Enzymes; Eukaryota; Excision; Exposure to; Genes; Genome Stability; Genomic Instability; Genomics; Goals; Homologous Gene; Human; Human Genome; Hypersensitivity; LIG4 gene; Laboratories; Lead; Malignant Neoplasms; Mediating; Metabolism; Mutation; Nonhomologous DNA End Joining; Normal Cell; Nucleotide Excision Repair; Organism; Pathway interactions; Poly(ADP-ribose) Polymerases; Polymerase; Process; Proteins; Reaction; Reagent; Recruitment Activity; Regulation; Role; Series; Single Strand Break Repair; Structure; Therapeutic; Tumor Suppression; Two-Hybrid System Techniques; XRCC1 gene; Yeasts; base; cancer cell; inhibitor/antagonist; insight; mutant; neoplastic cell; novel; polypeptide; prevent; protein protein interaction; public health relevance; recombinational repair; repaired; response; small molecule

DESCRIPTION (provided by applicant): The human genome is subject to constant attack by endogenous and environmental DNA damaging agents. If unrepaired, DNA lesions will give rise to mutations that in turn may lead to cancer formation. Fortunately, a complex network of DNA repair pathways operates to remove DNA lesions. To assess the biological significance of exposure to environmental DNA damaging agents, it is necessary to understand the details of the complex cellular response to DNA damage. Unlike the conserved LIG1 and LIG4 genes, lower eukaryotes lack a homolog of the mammalian LIG3 gene, which encodes at least three distinct polypeptides. Interestingly, the DNA ligase III?-associated proteins, poly (ADP-ribose) polymerase 1 (PARP-1), XRCC1 and DNA polymerase (Pol) ?, each of which have been implicated in base excision repair and the repair of DNA single strand breaks, are also found only in higher eukaryotes. Using a modified yeast two hybrid assay, we have identified a series of XRCC1 mutants that are defective in specific protein-protein interactions. In Specific Aim 1, we will utilize these mutants to delineate the functional and biological consequences of protein-protein interactions between DNA ligase III?/XRCC1 and other proteins involved in base excision and single strand break repair. Recent studies have increased the repertoire of DNA repair transactions in which DNA ligase III?/XRCC1 participates. In Specific Aim 2, we will determine how DNA ligase III?/XRCC1 is recruited to the DNA nucleotide excision repair machinery and whether this involves an interaction between XRCC1 and PCNA. In preliminary studies, we have identified an interaction between DNA ligase III?/XRCC1 and hRad50/hMre11/Nbs. In Specific Aim 3, we will determine how DNA damage regulates this interaction and whether these proteins act together in an error-prone non-homologous end-joining sub pathway that repairs DNA double strand breaks. Interestingly, this error-prone pathway is up-regulated in cancer cells and may contribute to their characteristic genomic instability. In Specific Aim 4, we will identify and characterize small molecule inhibitors of DNA ligase III. We envision that that these inhibitors will not only be valuable reagents for elucidating the cellular functions of the LIG3 gene products but also may serve as lead compounds for the development of novel anti-cancer agents. PUBLIC HEALTH RELEVANCE: It is well established that genomic instability drives the progression from a normal cell into a cancer cell. Human cells have a complex network of pathways that act together to maintain genome stability. A mechanistic understanding of these pathways will provide fundamental insights into tumor suppression. In addition, genomic instability is a characteristic of tumor cells, indicating that there are differences in the pathways that normally maintain stability. These differences between normal and cancer cells offer an opportunity to develop therapeutic strategies that selectively target cancer cells.

描述（由申请人提供）：人类基因组受到内源性和环境DNA损伤剂的不断攻击。如果不进行修复，DNA损伤将引起突变，进而可能导致癌症的形成。幸运的是，一个复杂的DNA修复通路网络可以去除DNA损伤。为了评估暴露于环境DNA损伤剂的生物学意义，有必要了解DNA损伤的复杂细胞反应的细节。与保守的LIG1和LIG4基因不同，低等真核生物缺乏与哺乳动物LIG3基因同源的基因，后者编码至少三种不同的多肽。有趣的是，DNA连接酶III？-相关蛋白、聚（adp -核糖）聚合酶1 （PARP-1）、XRCC1和DNA聚合酶（Pol） ？它们都与碱基切除修复和DNA单链断裂修复有关，也只在高等真核生物中发现。利用改良酵母双杂交实验，我们已经鉴定出一系列XRCC1突变体在特定蛋白质-蛋白质相互作用中存在缺陷。在特异性目标1中，我们将利用这些突变体来描述DNA连接酶III？/XRCC1和其他参与碱基切除和单链断裂修复的蛋白。最近的研究增加了DNA修复交易的曲目，其中DNA连接酶III？/ XRCC1参与。在特异性目标2中，我们将确定DNA连接酶III如何？/XRCC1被招募到DNA核苷酸切除修复机制中，以及这是否涉及XRCC1与PCNA之间的相互作用。在初步研究中，我们已经确定了DNA连接酶III？/XRCC1和hRad50/hMre11/Nbs。在Specific Aim 3中，我们将确定DNA损伤如何调节这种相互作用，以及这些蛋白质是否在一个容易出错的非同源末端连接亚途径中共同作用，修复DNA双链断裂。有趣的是，这种容易出错的途径在癌细胞中被上调，并可能导致其特有的基因组不稳定性。在Specific Aim 4中，我们将鉴定和表征DNA连接酶III的小分子抑制剂。我们设想这些抑制剂不仅将成为阐明LIG3基因产物细胞功能的有价值试剂，而且可能作为开发新型抗癌药物的先导化合物。