The q-bio Summer School
The q-bio Summer School
批准号:
9002062
负责人:
JEFF M HASTY
金额:
$16.88万
依托单位国家:
美国
项目类别:
财政年份:
2013
资助国家:
美国
项目状态:
已结题
起止时间:
2013-04-01 至 2017-01-31
关键词:
BehaviorBioinformaticsBiologicalBiologyCareer ChoiceCareer MobilityCell modelCell physiologyCellsChemistryCommunicationCommunitiesComplexComputational TechniqueComputer SimulationComputer softwareComputersComputing MethodologiesCuesDataEducationEducational BackgroundEducational CurriculumEducational workshopEngineeringEthnic OriginEventExposure toFinancial SupportFundingFutureGenderGene Expression RegulationGenerationsGoalsHealthHeterogeneityImmune systemIndividualInstitutionInternationalInternetMachine LearningMathematicsMentorsMinority-Serving InstitutionModelingMolecularMotivationNational Institute of General Medical SciencesNeuronsOccupationsParticipantPhysicsPopulationPostdoctoral FellowProfessional CompetenceQualifyingRaceReportingResearchResearch PersonnelResourcesSchoolsScientistSeriesSignal TransductionSocial NetworkStatistical Data InterpretationStatistical ModelsStudentsSynthetic GenesSystemSystems BiologyTechniquesTimeTrainingUnderrepresented GroupsUnited States National Institutes of HealthViralWomanWorkbiochemical modelbiological researchcareercareer developmentcomputational neurosciencecomputerized toolsdemographicsgraduate studentimprovedinterestlearning materialslecture noteslecturerlecturesmathematical modelmembermodel designmultidisciplinarypeerphysical scienceposterspredictive modelingprogramsresearch studyresponsesimulationskillsstatisticssymposiumsynthetic biologytool
中文摘要
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英文摘要
DESCRIPTION (provided by applicant): The purpose of the Annual q-bio Summer School, founded in 2007 in Los Alamos, NM, is to advance predictive modeling of cellular regulatory systems by providing trtaining in mathematical, statistical, and computational techniques that are important in systems and synthetic biology. A secondary goal is to advance the careers of researchers new to quantitative biology. The school consists of courses in six subjects: 1) stochastic gene regulation, 2) cell signaling, 3) biomolecular simulations, 4) viral dynamics, 5) synthetic biology, and 6) computational neuroscience. Demand for training in quantitative biology is increasing rapidly-the number of qualified summer school applicants increased from fewer than 40 in 2010 to over 170 in 2012. In response to this demand, we expanded the school in 2012 to accommodate more students. The school now takes place at two campuses, in Santa Fe, NM (courses 1-4) and in San Diego, CA (courses 5-6). Approximately 30 students attend at each campus and are diverse in terms of educational background (mathematics, engineering, physical sciences, and biology), career level (~75% are graduate students, ~20% are postdocs, and ~5% are more advanced), and demographics (gender, race, ethnicity, and worldwide geographical origin). Students attend all core lectures in the courses offered at their campus, as well as specialized course-specific lectures, student get-to-know-me talks, and other talks (e.g., talks focused on career skills), and participate in hands-on computer labs and mentored projects. After two intensive weeks, all students gather in Santa Fe for a 2-day q- bio Student Symposium, which features student projects reports, student poster presentations, and external invited speakers. All students then attend the 4-day q-bio Conference, an international conference attended by >200 researchers. All q-bio Summer School participants can expect the following: a) broad exposure to mathematical/statistical/computational tools used in quantitative biology, b) in-depth training in techniques of special interest (i.e., in one of the six course subjects) through course-specific lectures, computer labs, and mentored projects; c) multiple opportunities to practice scientific communication through talks and poster presentations; d) exposure to cutting-edge research, and e) extensive networking opportunities with peers and thought leaders. Lecturers and speakers include more than 50 different researchers active in quantitative biology, including very distinguished scientists. For example, in 2013, confirmed lecturers include six academicians. By the time the students attend the q-bio Conference, they are equipped with a powerful social network that facilitates interactions, idea exchange, and initiation of collaborative research. The long-term goal of the school is to change the way biological research is conducted, making biology a more quantitative field, like physics and chemistry. In this effort, the organizers are supported by significant goodwill from the international quantitative biology community and a number of local institutions, including two national centers for systems biology. However, to maintain and improve the school, additional financial support is required.
期刊论文(4)
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The finite state projection approach to analyze dynamics of heterogeneous populations.
用于分析异质群体动态的有限状态投影方法。
DOI:
10.1088/1478-3975/aa6e5a
发表时间:
2017
期刊:
Physical biology
影响因子:
2
作者:
[Johnson,Rob, Munsky,Brian]
通讯作者:
Munsky,Brian
The eighth q-bio conference: meeting report and special issue preface.
第八届q-bio会议:会议报告及特刊序言。
DOI:
10.1088/1478-3975/12/6/060401
发表时间:
2015
期刊:
Physical biology
影响因子:
2
作者:
[Hlavacek,WilliamS, Gnanakaran,S, Munsky,Brian, Wall,MichaelE, Faeder,JamesR, Jiang,Yi, Nemenman,Ilya, Resnekov,Orna]
通讯作者:
Resnekov,Orna
Using noise to control heterogeneity of isogenic populations in homogenous environments.
使用噪声来控制同质环境中同基因群体的异质性。
DOI:
10.1088/1478-3975/12/4/045003
发表时间:
2015
期刊:
Physical biology
影响因子:
2
作者:
[Szymańska,Paulina, Gritti,Nicola, Keegstra,JohannesM, Soltani,Mohammad, Munsky,Brian]
通讯作者:
Munsky,Brian
DOI:
10.1016/j.celrep.2014.05.053
发表时间:
2014-07-10
期刊:
Cell reports
影响因子:
8.8
作者:
[Senecal A, Munsky B, Proux F, Ly N, Braye FE, Zimmer C, Mueller F, Darzacq X]
通讯作者:
Darzacq X
Development of Engineered Native Bacteria as a Tool for Functional Manipulation of the Gut Microbiome
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批准号:10737475
-
项目类别:
-
资助金额:$78.86万
-
财政年份:2023
-
负责人:JEFF M HASTY
-
依托单位:
Reprogramming cell-fate decisions through predictive modeling and synthetic biology
-
批准号:10784558
-
项目类别:
-
资助金额:$3.33万
-
财政年份:2022
-
负责人:JEFF M HASTY
-
依托单位:
Reprogramming cell-fate decisions through predictive modeling and synthetic biology
-
批准号:10344041
-
项目类别:
-
资助金额:$60.77万
-
财政年份:2022
-
负责人:JEFF M HASTY
-
依托单位:
Reprogramming cell-fate decisions through predictive modeling and synthetic biology
-
批准号:10706965
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项目类别:
-
资助金额:$60.77万
-
财政年份:2022
-
负责人:JEFF M HASTY
-
依托单位:
Reprogramming cell-fate decisions through predictive modeling and synthetic biology
-
批准号:10908026
-
项目类别:
-
资助金额:$13.31万
-
财政年份:2022
-
负责人:JEFF M HASTY
-
依托单位:
Design and characterization of bacterial population dynamics in solid tumor models
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批准号:10212134
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项目类别:
-
资助金额:$64.29万
-
财政年份:2021
-
负责人:JEFF M HASTY
-
依托单位:
Design and characterization of bacterial population dynamics in solid tumor models
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批准号:10456087
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项目类别:
-
资助金额:$62.84万
-
财政年份:2021
-
负责人:JEFF M HASTY
-
依托单位:
A microbiome-informed platform for the development and testing of bacterial therapies for colorectal cancer
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批准号:10166805
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项目类别:
-
资助金额:$57.99万
-
财政年份:2020
-
负责人:JEFF M HASTY
-
依托单位:
A microbiome-informed platform for the development and testing of bacterial therapies for colorectal cancer
-
批准号:9974305
-
项目类别:
-
资助金额:$59.3万
-
财政年份:2020
-
负责人:JEFF M HASTY
-
依托单位:
A microbiome-informed platform for the development and testing of bacterial therapies for colorectal cancer
-
批准号:10397153
-
项目类别:
-
资助金额:$56.85万
-
财政年份:2020
-
负责人:JEFF M HASTY
-
依托单位:
A microbiome-informed platform for the development and testing of bacterial therapies for colorectal cancer
-
批准号:10631898
-
项目类别:
-
资助金额:$56.85万
-
财政年份:2020
-
负责人:JEFF M HASTY
-
依托单位:
Network-Driven Dynamics of Replicative Aging
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批准号:10176323
-
项目类别:
-
资助金额:$55.71万
-
财政年份:2017
-
负责人:JEFF M HASTY
-
依托单位:
Network-Driven Dynamics of Replicative Aging
-
批准号:10659600
-
项目类别:
-
资助金额:$57.66万
-
财政年份:2017
-
负责人:JEFF M HASTY
-
依托单位:
Network-Driven Dynamics of Replicative Aging
-
批准号:10428418
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项目类别:
-
资助金额:$11.85万
-
财政年份:2017
-
负责人:JEFF M HASTY
-
依托单位:
Network-Driven Dynamics of Replicative Aging
-
批准号:9369740
-
项目类别:
-
资助金额:$54.31万
-
财政年份:2017
-
负责人:JEFF M HASTY
-
依托单位:
Network-Driven Dynamics of Replicative Aging
-
批准号:10202354
-
项目类别:
-
资助金额:$11.81万
-
财政年份:2017
-
负责人:JEFF M HASTY
-
依托单位:
The q-bio Summer School
-
批准号:8643269
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项目类别:
-
资助金额:$17.12万
-
财政年份:2013
-
负责人:JEFF M HASTY
-
依托单位:
The q-bio Summer School
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批准号:8475276
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项目类别:
-
资助金额:$17.46万
-
财政年份:2013
-
负责人:JEFF M HASTY
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依托单位:
MICROFLUIDICS AND SYNTHETIC BIOLOGY CORE
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批准号:8957389
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项目类别:
-
资助金额:$6.98万
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财政年份:2010
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负责人:JEFF M HASTY
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依托单位:
Delays and variability in single-cell NFkB signaling
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批准号:7768106
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项目类别:
-
资助金额:$54.29万
-
财政年份:2010
-
负责人:JEFF M HASTY
-
依托单位:
海外基金