Investigating human transfer RNA variants that cause errors in protein synthesis

研究导致蛋白质合成错误的人类转移 RNA 变异

• 批准号: 580241-2022
• 负责人: ODonoghue, PatrickPM
• 金额: $ 1.82万
• 依托单位: University of Western Ontario
• 依托单位国家: 加拿大
• 项目类别: Alliance Grants
• 财政年份: 2022
• 资助国家: 加拿大
• 起止时间: 2022-01-01 至 2023-12-31
• 项目状态: 已结题
• 来源: https://www.nserc-crsng.gc.ca/ase-oro/Details-Detailles_eng.asp?id=744050
• 关键词: Investigating; human; transfer; RNA; variants

All cells contain a set of transfer RNAs (tRNAs), which are molecular adaptors connecting the sequences of nucleic acids in genes to the sequences of amino acids in proteins. The aminoacyl-tRNA synthetases are responsible for ligating a specific tRNA with the correct amino acid. In all living cells, protein coding genes are transcribed into messenger RNAs (mRNAs), in which tri-nucleotide sequences, called codons, are decoded by the anticodon of the appropriate tRNA via base pairing on the ribosome to synthesize proteins of defined sequence. The new international collaboration with Dr. Todd Lowe at the University of California Santa Cruz (UCSC) will generate synergy with my lab's expertise in tRNA biology to determine how naturally occurring tRNA variants effect protein synthesis in human cells. Dr. Lowe stunned the research community by mapping human genetic variants to individual tRNA genes, revealing a diversity of tRNA mutations in our population. This project will (aim 1) characterize the ability of naturally occurring tRNA variants to cause malfunction by incorporating the wrong amino acid at a set of codons and (aim 2) determine how the regions up and down stream of tRNA genes impact expression levels. Because humans encode over 600 tRNA genes, our studies will use tRNA variants to map otherwise identical tRNA transcripts to specific tRNA genes for the first time. My lab will determine the impact of human tRNA variants on protein synthesis, while Dr. Lowe's lab will contribute state-of-the-art tRNA sequencing to precisely quantify the levels of mutant tRNAs in cells. The anticipated outcomes will contribute to a major scientific breakthrough by revealing the unexpected ability of human cells to tolerate errors in protein synthesis. Quantitation of tRNA levels is essential to determine the function of the many human tRNA genes and critical to the research objectives. Access to tRNA sequencing expertise is currently non-existent in Canada. The work will benefit Canadians by importing new and cutting-edge biotechnology to Canada and expanding fundamental knowledge about human tRNA biology in normal cells.

所有细胞都含有一组转运RNA（tRNA），它们是连接基因中核酸序列和蛋白质中氨基酸序列的分子接头。氨酰-tRNA合成酶负责将特定的tRNA与正确的氨基酸连接。在所有活细胞中，蛋白质编码基因被转录成信使RNA（mRNA），其中三核苷酸序列（称为密码子）通过核糖体上的碱基配对由适当tRNA的反密码子解码以合成具有确定序列的蛋白质。与圣克鲁斯加州（UCSC）的托德洛博士的新的国际合作将与我的实验室在tRNA生物学方面的专业知识产生协同作用，以确定天然存在的tRNA变体如何影响人类细胞中的蛋白质合成。Lowe博士通过将人类遗传变异映射到单个tRNA基因，揭示了我们人群中tRNA突变的多样性，震惊了研究界。该项目将（目标1）表征天然存在的tRNA变体通过在一组密码子处掺入错误的氨基酸而导致故障的能力，并（目标2）确定tRNA基因的上游和下游区域如何影响表达水平。由于人类编码超过600个tRNA基因，我们的研究将首次使用tRNA变体将其他相同的tRNA转录本映射到特定的tRNA基因。我的实验室将确定人类tRNA变体对蛋白质合成的影响，而Lowe博士的实验室将提供最先进的tRNA测序，以精确定量细胞中突变tRNA的水平。预期的结果将通过揭示人类细胞在蛋白质合成中耐受错误的意想不到的能力来促成重大的科学突破。tRNA水平的定量对于确定许多人类tRNA基因的功能是必不可少的，并且对研究目标至关重要。目前在加拿大无法获得tRNA测序专门知识。这项工作将通过向加拿大进口新的尖端生物技术和扩大有关正常细胞中人类tRNA生物学的基础知识而使加拿大人受益。