与类鼻疽伯克霍尔德菌分子伴侣蛋白Hfq互作新sRNA的生物学功能研究
结题报告
批准号:
81960002
项目类别:
地区科学基金项目
资助金额:
34.0 万元
负责人:
夏乾峰
依托单位:
学科分类:
呼吸系统感染、炎症与免疫
结题年份:
2023
批准年份:
2019
项目状态:
已结题
项目参与者:
夏乾峰
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中文摘要
类鼻疽伯克霍尔德菌(Bp)所致的类鼻疽误诊率和病死率极高,其致病机制不清,缺乏可靠的疫苗,被美国CDC归为B类生物恐怖菌,海南是我国类鼻疽病例数最多的地区。细菌非编码小RNA(sRNA)多数可结合分子伴侣蛋白Hfq与靶RNA互作,调控细菌环境耐受、毒力产生和代谢等生命活动,但在Bp中被发现和阐明生物学功能的sRNA极少。我们前期完成了Bp的全基因组测序,通过以Hfq蛋白为基础的免疫共沉淀技术和RNA-seq测序分析,发现并鉴定了9种新的sRNA。本项目拟构建sRNA缺失株和回复株,观察它们的相关表型和环境适应力的变化;通过细胞和动物试验来研究sRNA对毒力的影响;采用差异转录组和差异蛋白谱分析,寻找差异表达的基因,获得转录水平的sRNA调控元,并对基因功能进行分类。项目将阐明Bp新sRNA的重要生物学功能、致病和耐药机制,为抗Bp感染提供新的分子靶标,也为类鼻疽的防治提供新思路和理论依据。
英文摘要
Melioidosis results from infection with Burkholderia pseudomallei and is associated with high mortality and misdiagnosis rates. The organism can infect any organ system, although the lung is the most common organ affected. Hainan island is regarded as a main endemic area in China. Currently, our understanding of the pathogenesis about the pathogen is limited, there is no reliable vaccine for melioidosis, and therefore, B. pseudomallei is considered a potential bioterrorism threat and is listed as a category B agent by the U.S. Centers for Disease Control and Prevention. In most cases, small noncoding RNAs (sRNAs) require the RNA chaperone Hfq for optimal regulation by promoting sRNA-mRNA pairing and by stabilizing some sRNAs in vivo and act as important regulators in response to stress, virulence and metabolism in bacteria. However, the presence and roles of sRNAs in B. pseudomallei remain largely unclear. We used a method that took advantage of the conserved inherent sRNAs-binding capability of Hfq to enrich sRNAs from B. pseudomallei and validated 9 novel sRNAs. To study the function of these nine sRNAs on accommodated environment stress and virulence, we will use the λ-Red-mediated recombination method to construct a B. pseudomallei sRNAs deletion mutant and observe the effect of growth status under various environment stress, we perform a growth curve on wild type, sRNAs mutant and complemented strains. To determine ascertain these sRNAs are essential for virulence, invasion assays will be performed with the sRNAs mutant and wild-type strains both in vitro and vivo. To further explore the specific mechanism of sRNAs, differential target mRNA and protein regulated by the sRNAs mutant to the wild-type will be identified by the microarray and proteomics technology from mRNA and protein levels and be classified by biological function. The study will provide pathogenicity mechanism and function of sRNAs for further research, and find a new strategy for melioidosis prevention and cure.
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DOI:10.1007/s00604-022-05402-6
发表时间:2022-08
期刊:Microchimica Acta
影响因子:5.7
作者:Yuexin Wang;Rui Chen;Bo Shen;Cai-xia Li;Junman Chen;Yanshuang Wang;Shen Tian;Xuemiao Li
通讯作者:Yuexin Wang;Rui Chen;Bo Shen;Cai-xia Li;Junman Chen;Yanshuang Wang;Shen Tian;Xuemiao Li
DOI:10.1016/j.snb.2022.133204
发表时间:2022-12
期刊:Sensors and Actuators B: Chemical
影响因子:--
作者:Shoujia Lin;Yingzi Lin;Jie Wu;Guangming Li;Xiaotian Wu;Nini Luo;Wenting Li;Chuanlong Zhu;Rui Liu;Qiqi Xu;Qianfeng Xia;H. Ju
通讯作者:Shoujia Lin;Yingzi Lin;Jie Wu;Guangming Li;Xiaotian Wu;Nini Luo;Wenting Li;Chuanlong Zhu;Rui Liu;Qiqi Xu;Qianfeng Xia;H. Ju
DOI:10.4103/2221-1691.280295
发表时间:2020-04
期刊:Asian Pacific Journal of Tropical Biomedicine
影响因子:1.7
作者:M. Rajaofera;Xun Kang;Pengfei Jin;Xin Chen;Chenchu Li;Lijun Yin;Lin Liu;Qing-hui Sun;N. Zhang;Chuizhe Chen;Na He;Qianfeng Xia;W. Miao
通讯作者:M. Rajaofera;Xun Kang;Pengfei Jin;Xin Chen;Chenchu Li;Lijun Yin;Lin Liu;Qing-hui Sun;N. Zhang;Chuizhe Chen;Na He;Qianfeng Xia;W. Miao
DOI:10.1186/s40249-022-01012-9
发表时间:2022-08-04
期刊:Infectious diseases of poverty
影响因子:8.1
作者:
通讯作者:
DOI:10.1128/spectrum.01125-23
发表时间:2023-12-12
期刊:MICROBIOLOGY SPECTRUM
影响因子:3.7
作者:Yao, Juan;Zhang, Zhang;Tian, Shen;Luo, Nini;Tan, Jun;Zhang, Yue;Gu, Shuo;Xia, Qianfeng
通讯作者:Xia, Qianfeng
基于PhIP-seq技术筛选类鼻疽诊断标志物及快速免疫检测新方法的建立
  • 批准号:
    82370018
  • 项目类别:
    面上项目
  • 资助金额:
    70万元
  • 批准年份:
    2023
  • 负责人:
    夏乾峰
  • 依托单位:
T6SS-4在类鼻疽伯克霍尔德菌致病性和生物学功能中的作用
  • 批准号:
    81560002
  • 项目类别:
    地区科学基金项目
  • 资助金额:
    40.0万元
  • 批准年份:
    2015
  • 负责人:
    夏乾峰
  • 依托单位:
海南岛类鼻疽伯克霍尔德菌自然疫源地调查与基因多态性研究
  • 批准号:
    81360240
  • 项目类别:
    地区科学基金项目
  • 资助金额:
    50.0万元
  • 批准年份:
    2013
  • 负责人:
    夏乾峰
  • 依托单位:
国内基金
海外基金