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Characterisation and evolution of chromosome complements of carnivorous Lentibulariaceae

Characterisation and evolution of chromosome complements of carnivorous Lentibulariaceae
肉食性扁豆科染色体互补体的特征和进化
批准号:
212721201
负责人:
Professor Dr. Ingo Schubert
金额:
$0.0万
依托单位国家:
德国
项目类别:
Research Grants
财政年份:
2012
资助国家:
德国
项目状态:
已结题
起止时间:
2011-12-31 至 2014-12-31

项目摘要

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中文摘要
翻译
世界分布的香豆科具有极大的可塑性,染色体数目可变,高碱基替换率和独特的捕食机制。这个有趣的植物家族的基因组和染色体互补很少被研究。为Genlisea pygmaea。(76 Mbp;n=15)与最小的植物基因组之一,对于棉属(175 Mbp;n=18或19)和对毛棉(1530 Mbp,n=17或18),基本倍性水平(二倍体与多倍体),着丝粒结构(单着丝粒与多着丝粒),关于异染色质、端粒和rDNA的染色体构成以及表观遗传标记的亚核分布将被确定。将建立一个BAC文库,并将其排序为平铺路径,用于通过比较染色体绘制来阐明Genlisea属和潜在的其他Lentibuariaceae物种的核型进化,特别是染色体数量变化的原因。它的目的是找出,是否相似或不同的机制形成香菇科核型,与其他种子植物科所描述的情况相比较。通过绘制和测序BAC池的相互绘制,可以揭示十字花科植物A.thaliana的同源性。
英文摘要
The cosmopolitan Lentibulariaceae family is characterized by extreme plasticity of genome size, variable chromosome numbers, high base substitution rates and unique trapping mechanisms for carnivory. Genomes and chromosome complements of this interesting plant family are only scarcely studied. For Genlisea pygmaea. (76 Mbp; n=15) with one of the smallest plant genomes, for G. margaretae (175 Mbp; n=18 or 19) and for G. hispidula (1530 Mbp, n=17 or 18), the basic ploidy level (diploidy vs. polyploidy), the centromere structure (monocentric vs. polycentric), the chromosomal constitution regarding heterochromatin, telomeres, and rDNA as well as the subnuclear distribution of epigenetic markers will be determined. A BAC library will be established, ordered into a tiling path and used to elucidate karyotype evolution, in particular the reasons of chromosome number alteration, within the genus Genlisea and potentially other Lentibulariaceae species via comparative chromosome painting. It is aimed to find out, whether similar or alternative mechanisms shaped Lentibulariaceae karyotypes, compared to the situation described for other seed plant families. Reciprocal painting with mapped and sequenced BAC pools will reveal the degree of synteny to A. thaliana, a member of the Brassicaceae family.
期刊论文(4)
专著(0)
科研奖励(0)
会议论文
DOI: 10.3835/plantgenome2015.04.0021
发表时间: 2015-11
期刊: The Plant Genome
影响因子: --
作者: [G. H. Vu;Thomas Schmutzer;F. Bull;H. X. Cao;J. Fuchs;Trung D. Tran;G. Jovtchev;K. Pistrick;N. Stein;A. Pečinka;P. Neumann;P. Novák;J. Macas;P. Dear;F. Blattner;U. Scholz;I. Schubert]
通讯作者: G. H. Vu;Thomas Schmutzer;F. Bull;H. X. Cao;J. Fuchs;Trung D. Tran;G. Jovtchev;K. Pistrick;N. Stein;A. Pečinka;P. Neumann;P. Novák;J. Macas;P. Dear;F. Blattner;U. Scholz;I. Schubert
Centromere and telomere sequence alterations reflect the rapid genome evolution within the carnivorous plant genus Genlisea.
着丝粒和端粒序列的改变反映了食虫植物属内基因组的快速进化
DOI: 10.1111/tpj.13058
发表时间: 2015
期刊: The Plant journal : for cell and molecular biology
影响因子: --
作者: [Trung D. Tran, Hieu X. Cao, Gabriele Jovtchev, Pavel Neumann, Petr Novák, Miloslava Fojtová, Giang T.H. Vu, Jiří Macas, Jiří Fajkus, Ingo Schubert, Joerg Fuchs]
通讯作者: Joerg Fuchs
Establishing a chromosome map for Spirodela polyrhiza, chromosome homeology and karyotype evolution within the aquatic, largely asexual Lemnoideae, a basic monocot group of potential economic importance
  • 批准号:
    256417479
  • 项目类别:
    Research Grants
  • 资助金额:
    $0.0万
  • 财政年份:
    2014
  • 负责人:
    Professor Dr. Ingo Schubert
  • 依托单位:
Variability of DSB repair in plant development and genome evolution, at molecular and chromosomal level
  • 批准号:
    214652223
  • 项目类别:
    Research Grants
  • 资助金额:
    $0.0万
  • 财政年份:
    2012
  • 负责人:
    Professor Dr. Ingo Schubert
  • 依托单位:
Functional characterization of the plant centromeric histone variant CENH3 as a prerequisite to understand kinetochore formation
  • 批准号:
    36126121
  • 项目类别:
    Research Grants
  • 资助金额:
    $0.0万
  • 财政年份:
    2006
  • 负责人:
    Professor Dr. Ingo Schubert
  • 依托单位:
Dynamics of interphase chromosome territories and occurrence of homologous pairing of Arabidopsis chromosomes
  • 批准号:
    5419111
  • 项目类别:
    Research Grants
  • 资助金额:
    $0.0万
  • 财政年份:
    2003
  • 负责人:
    Professor Dr. Ingo Schubert
  • 依托单位:
国内基金
海外基金
Galaxy Analytical Modeling Evolution (GAME) and cosmological hydrodynamic simulations.
  • 批准号:
  • 项目类别:
    省市级项目
  • 资助金额:
    10.0万元
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    2025
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镍基UNS N10003合金辐照位错环演化机制及其对力学性能的影响研究
Understanding structural evolution of galaxies with machine learning
  • 批准号:
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    省市级项目
  • 资助金额:
    10.0万元
  • 批准年份:
    2022
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发展/减排路径(SSPs/RCPs)下中国未来人口迁移与集聚时空演变及其影响
  • 批准号:
    19ZR1415200
  • 项目类别:
    省市级项目
  • 资助金额:
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  • 批准年份:
    2019
  • 负责人:
    夏海斌
  • 依托单位: