Material collection for comprehensive phylogeny of the family Dipterocarpaceae
Material collection for comprehensive phylogeny of the family Dipterocarpaceae
批准号:
17405032
负责人:
ALFRED E
金额:
$9.17万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2005
资助国家:
日本
项目状态:
已结题
起止时间:
2005 至 2007
中文摘要
1.对印度和斯里兰卡进行了为期一个月的旅行。在旅途中,采集了产于印度西高止山脉和斯里兰卡的龙脑香科15种植物的样本。连同以前收集的样本,我们现在拥有代表该科在亚洲发生的所有属的样本。此外,还采集了以下红树植物种群的样本:木本植物木本植物、两性木本植物和细根。首次发表了基于叶绿体DNA序列的双果亚科的全面分子系统学(Gamage,et.艾尔2006).3.完成了一篇硕士论文(青瓦台)。材料取自印度尼西亚产的Shorea属四个种的种群。从印度尼西亚获得的标本已被用于研究小叶珊瑚的地理史。这是基于对两个核基因定位的DNA多态性的分析。MySql数据库,包含La…中存储的所有样本的列表更多的硼酸盐(包括在本项目中采购的那些)可在以下网站上供公众查阅:http://genetics.biology.kyushu-u.ac.jp.7.泰国进行了为期十天的旅行。在这次旅行中,我们收集了来自全国不同地区的另外30多种龙脑香科植物的样本。此外,我们还采集了两种红树植物的样本:细根状根霉属(Rhizophora Apulata)和短根状根霉属(Rumronata)。此外,还在中国南方采集了龙脑香科的其他种的标本。在下列国际期刊上发表了七篇论文:遗传学、分子生物学和进化论、基因和遗传系统、加拿大森林研究杂志和树木遗传学和基因组。九州大学生物系为一名理科学士(岩屋千寻)和三名博士论文(石山广子、伊斯梅尔·哈塔布、荒木·T·内顿)辩护。在日本、西班牙、德国和联合王国举行的国际会议上作了七次发言。托管示例数据库的Web服务器的操作系统已被最新版本的SuSE Linux10.3取代。MySQL服务器也进行了升级,它为我们的数据库和ApacheWeb服务提供了支持。磁盘空间扩展了500 GB。12.一个包含160000多个参考文献的新文献数据库已经建立,目前正在准备在我们的服务器上公开部署
英文摘要
1. One month long trip was made to India and Sri Lanka. During the trip samples were collected from 15 species from Dipterocarpaceae family occurring in the Indian Western Ghats and Sri Lanka. Together with samples collected previously, we now possess samples representing all genera of this family occurring in Asia. In addition, samples were collected in populations of the following mangrove species: Bruguiera gymnorrhiza, B. sexangula and Rhizophora apiculata.2. First comprehensive molecular phylogeny of the sub-family Dipterocarpoideae based on chloroplast DNA sequences was published (Gamage, et. al. 2006).3. One MSc thesis was completed (Aoi Saitoh).4. Material from populations of four species from the genus Shorea occurring in Indonesia.5. Samples obtained from Indonesia have been used for a study of geographic history of Shorea parvifolia . It is based on analysis of DNA polymorphism in two nuclear gene loci.6. MySQL powered database containing list of all samples stored in our la … More boratory(including those procured in the present project) is available for public access on the following website: http://genetics.biology.kyushu-u.ac.jp.7. Ten days trip was made to Thailand. During this trip we collected samples from more than 30 additional species of Dipterocarpaceae from different parts of the country. In addition, we also collected samples from two mangrove species: Rhizophora apiculata and R. mucronata. Furthermore, samples of additional species of Dipterocarpaceae were also collected in southern China.8. Seven papers have been published in the following international journals: Heredity, Molecular Biology and Evolution, Genes and Genetic Systems, Canadian Journal of Forest Research and Tree Genetics and Genomes.9. One BSc (Iwaya Chihiro) and three PhD theses (Ishiyama Hiroko, Ismael Khatab, Araki T. Neyton)were defended at the Department of Biology, Kyushu University.10. Seven presentations were made at international conferences in Japan, Spain, Germany and United Kingdom.11. The operating system of our web server hosting the sample database has been replaced with the latest version of SuSE Linux 10.3. An upgrade has also been to MySQL server, which powers our database and to the Apache web service. Disk space has been extended by 500 GB.12. A new literature database containing more than 160000 references has been built and is currently being prepared for public deployment on our server Less
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Demographic histoly of Larix sibirica and L.sukaczewii inferred from nucleotide variation of nuclear genes
从核基因核苷酸变异推断西伯利亚落叶松和苏卡泽维落叶松的人口统计
DOI:
--
发表时间:
2007
期刊:
影响因子:
--
作者:
[Khatab, I., Ishiyama, H., Inomata, N. and Szmidt, A.E.]
通讯作者:
A.E.
Pattern of nucleotide polymorphism in the gMdh nuclear gene region of Eurasian Larix(Pinaceae) species
欧亚落叶松(松科)种gMdh核基因区核苷酸多态性模式
DOI:
--
发表时间:
2006
期刊:
影响因子:
--
作者:
[A., Saitoh, N. H. T., Araki, N., Inomata, A. E., Szmidt]
通讯作者:
Szmidt
Phylogeography of larches(Larix spp Mill.) from Russia based on DNA variation of a nuclear gene
基于核基因 DNA 变异的俄罗斯落叶松 (Larix spp Mill.) 系统发育地理学
DOI:
--
发表时间:
2006
期刊:
影响因子:
--
作者:
[I., Khatab, H., Ishiyama, N., Inomata, A. E., Szmidt]
通讯作者:
Szmidt
Pattern of nucleotide polymorphism in the gMdh nuclear gene region of Eurasian Larix (Pinaceae) species
欧亚落叶松(松科)物种gMdh核基因区核苷酸多态性模式
DOI:
--
发表时间:
2006
期刊:
影响因子:
--
作者:
[Saitoh, A., Araki, N.H.T., Inomata, N.and Szmidt A.E]
通讯作者:
N.and Szmidt A.E
The demographic history of Shorea parvifolia(Dipterocarpaceae) inferred from nucleotide polymorphism at multiple nuclear genes
从多核基因核苷酸多态性推断小叶望天树(龙脑香科)的人口统计史
DOI:
--
发表时间:
2006
期刊:
影响因子:
--
作者:
[H., Ishiyama, I., Khatab, R., Finkeldey, N., Inomata, H., Tsumura, T., Yamazaki, A. E., Szmidt]
通讯作者:
Szmidt
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