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Crystal structure analysis of MFS transporter proteins

Crystal structure analysis of MFS transporter proteins
MFS转运蛋白的晶体结构分析
批准号:
18570101
负责人:
WATANABE Nobuhisa
金额:
$2.55万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2006
资助国家:
日本
项目状态:
已结题
起止时间:
2006 至 2007

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中文摘要
翻译
我们尝试构建了多药输出系统MFS、SMR和MATE中29个蛋白的表达系统。最后,分别建立了金黄色葡萄球菌QacA和NorA以及谷氨酸棒状杆菌CGL2611的表达纯化体系。我们也尝试使用Mistic融合表达系统,并证实了EbrA、EbrB、TetB(13个跨膜螺旋)和LmrB(14个跨膜螺旋)的表达。考察了QacA、NorA和CGL2611结晶样品制备的详细条件。通过透射电镜、CD测量和差示扫描量热法证实了添加假定底物的效果。对于QacA,假设底物罗丹明6G可以避免其聚集,并且三维结构也稳定。然而,在CGL2611的情况下,洗涤剂DDM在浓缩过程中存在问题,并且没有发现有效的制备底物。观察了5种去污剂和PEG400、PEG3350两种沉淀剂溶液的相图,建立了初始结晶条件。在此基础上,利用蒸汽扩散法和脂质立方相法在不同温度下筛选了QacA和NorA的初始结晶条件。观察到一些结晶物体,但没有得到衍射晶体
英文摘要
We have tried to construct expression systems for 29 proteins of multidrug export system MFS, SMR and MATE. Finally, expression and purification systems were established for three of them, QacA and NorA from Staphylococcus aureus, and CGL2611 from Corynebacterium glutamicum. We have also tried to use a Mistic fusion expression system, and have confirmed expression of EbrA, EbrB, TetB (13 transmembrane helices) and LmrB (14 transmembrane helices) .A detailed condition of preparing crystallization sample was examined for QacA, NorA and CGL2611. Effect of adding putative substrate was confirmed using Transmission Electron Microscope, CD measurement and Differential Scanning Calorimetry. For QacA, it was suggested that putative substrate Rhodamine 6G avoid its aggregation and three-dimensional structure was also stabilized. In the case of CGL2611, however, detergent DDM was troubling in a concentration process, and no putative substrate effective for its preparation was found.Phase diagram for solutions consist of 5 detergents and two precipitants, PEG400 and PEG3350, was observed, and initial crystallization conditions were established. With such informations, screening for initial crystallization conditions was done for QacA and NorA using a vapor diffusion method and a lipidic-cubic phase method at several temperatures. Some crystalline objects were observed, but no diffracting crystal was obtained
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Strategy to prepare integral membrane proteins for X-ray crystallography
用于 X 射线晶体学的整合膜蛋白的制备策略
DOI: --
发表时间: 2007
期刊:
影响因子: --
作者: [Ui, Okada, Nobuhisa, Watanabe, Isao, Tanaka]
通讯作者: Tanaka
Development of a high-pressure freeze trap method of protein crystals
  • 批准号:
    24657071
  • 项目类别:
    Grant-in-Aid for Challenging Exploratory Research
  • 资助金额:
    $2.66万
  • 财政年份:
    2012
  • 负责人:
    WATANABE Nobuhisa
  • 依托单位:
Time-resolved structure analysis of type-II restriction endonuclease HindIII
  • 批准号:
    22370036
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
  • 资助金额:
    $11.98万
  • 财政年份:
    2010
  • 负责人:
    WATANABE Nobuhisa
  • 依托单位:
High pressure protein crystal structure analysis
  • 批准号:
    21657027
  • 项目类别:
    Grant-in-Aid for Challenging Exploratory Research
  • 资助金额:
    $2.18万
  • 财政年份:
    2009
  • 负责人:
    WATANABE Nobuhisa
  • 依托单位:
Nano liter scale protein crystallization and development of an automatic crystal appraisal method
  • 批准号:
    13558086
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
  • 资助金额:
    $9.09万
  • 财政年份:
    2001
  • 负责人:
    WATANABE Nobuhisa
  • 依托单位:
海外基金