Whole Genome Sequencing

罗得岛州PAR-20-105实验室灵活资助模式项目总结 （LFFM）（U19）应用。学科A：微生物学，轨道4：全基因组测序 项目摘要 本项目的目的是让罗得岛州卫生实验室（RISHL） 协助全国范围内的食源性疾病暴发调查， 从食品和环境样本中获得的各种分离株， 网络目前，RISHL能够对沙门氏菌、STEC、李斯特菌、 弯曲杆菌和志贺氏菌，并正在努力通过PulseNet认证 对弧菌进行测序RISHL认识到捕捉电流的重要性， 人类和动物食品中非临床病原体的基因组多样性不断演变。为此 项目，RISHL将成为一个积极的GenomeTrakr成员输入的结果，包括 NCBI-NIH策划的国家肠道病原体基因组数据库。RISHL 还将参加GenomeTrakr会议，电话会议，能力测试和其他 国家实验室将继续开展活动，并应要求向其他国家实验室提供培训和指导。 1

Project Summary for State of Rhode Island PAR-20-105 Laboratory Flexible Funding Model (LFFM) (U19) Application. Discipline A: Microbiology, Track 4: Whole Genome Sequencing Project Summary The purpose of this project is for the Rhode Island State Health Laboratories (RISHL) to assist in nationwide foodborne illness outbreak investigations by sequencing and submitting a variety of isolates obtained from food and environmental samples to the GenomeTrakr network. Currently, the RISHL has the ability to sequence Salmonella, STEC, Listeria, Campylobacter and Shigella sp. and is also working on becoming certified through PulseNet to sequence Vibrio sp.. The RISHL recognizes the importance of capturing the current and evolving genomic diversity of non-clinical pathogens in human and animal food. For this project, RISHL will become an active GenomeTrakr member by entering results, including the metadata, to NCBI-NIH curated national database for enteric pathogen genomes. RISHL will also participate in GenomeTrakr meetings, conference calls, proficiency tests and other activities, as well as provide training and mentorship to other state laboratories, as requested. 1