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Underpinning UK Bioscience Research with high-throughput single molecule sequencing

Underpinning UK Bioscience Research with high-throughput single molecule sequencing
通过高通量单分子测序支撑英国生物科学研究
批准号:
BB/T017864/1
负责人:
Peter Keightley
金额:
$56.42万
依托单位:
依托单位国家:
英国
项目类别:
Research Grant
财政年份:
2020
资助国家:
英国
项目状态:
已结题
起止时间:
2020 至 --

项目摘要

项目成果

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中文摘要
翻译
基因组学革命正在进入第三阶段,技术的出现可以产生扩展到数百千碱基的单分子DNA测序数据。长DNA序列读取可用于生成高质量的参考基因组,以更好地了解基因表达,并在复杂混合物(如土壤或水的环境样品)中对DNA进行测序和排序。太平洋生物科学Sequel II系统是一种新的长读DNA测序平台,以可承受的成本生成大量数据。Sequel II的一个关键特点是,它可以通过多次读取DNA分子来纠正错误,从而产生高度准确的长读。这笔拨款将获得Sequel II平台,这是苏格兰的第一个平台,并将其嵌入爱丁堡基因组公司,使我们能够为生物和生物技术研究界提供低成本,高质量的长读测序服务。我们将利用这笔投资来支持那些希望为农业、生物技术、遗传学、免疫学和合成生物学等不同主题生成基因组数据的研究人员。
英文摘要
The genomics revolution is entering its third phase with the advent of technologies that can generate single molecule DNA sequencing data extending 100s of kilobases. Long DNA sequence reads can be used to generate high quality reference genomes, to better understand gene expression, and to sequence and sort DNA in complex mixtures such as environmental samples of soil or water. The Pacific Biosciences Sequel II System is a new long-read DNA sequencing platform that generates extremely large amounts of data at an affordable cost. A key feature of Sequel II is that it can generate highly accurate long reads, by reading a DNA molecule multiple times to correct errors. This grant will acquire the Sequel II platform, the first in Scotland, embed this within Edinburgh Genomics, and allow us to offer low-cost, high quality long read sequencing as a service to the biological and biotechnology research community. We will use the investment to support researchers who want to generate genomic data for diverse topics such as agriculture, biotechnology, genetics, immunology and synthetic biology.
期刊论文(4)
专著(0)
科研奖励(0)
会议论文
DOI: 10.1038/s41467-022-28605-0
发表时间: 2022-02-17
期刊: Nature communications
影响因子: 16.6
作者: [Talenti A, Powell J, Hemmink JD, Cook EAJ, Wragg D, Jayaraman S, Paxton E, Ezeasor C, Obishakin ET, Agusi ER, Tijjani A, Amanyire W, Muhanguzi D, Marshall K, Fisch A, Ferreira BR, Qasim A, Chaudhry U, Wiener P, Toye P, Morrison LJ, Connelley T, Prendergast JGD]
通讯作者: Prendergast JGD
Eusocial insect queens show costs of reproduction and transcriptomic signatures of reduced longevity
真社会性昆虫皇后表现出繁殖成本和寿命缩短的转录组特征
DOI: 10.1101/2022.03.20.485028
发表时间: 2022
期刊:
影响因子: --
作者: [Collins D]
通讯作者: Collins D
Costs of reproduction are present but latent in eusocial bumblebee queens.
繁殖的成本存在,但在欧洲大黄蜂皇后区潜在。
DOI: 10.1186/s12915-023-01648-5
发表时间: 2023-07-10
期刊: BMC BIOLOGY
影响因子: 5.4
作者: [Collins, David H., Prince, David C., Donelan, Jenny L., Chapman, Tracey, Bourke, Andrew F. G.]
通讯作者: Bourke, Andrew F. G.
Developing a high-throughput screen for the isolation of the model green alga Chlamydomonas reinhardtii from soil samples
  • 批准号:
    NE/T014091/1
  • 项目类别:
    Research Grant
  • 资助金额:
    $0.92万
  • 财政年份:
    2020
  • 负责人:
    Peter Keightley
  • 依托单位:
The nature of spontaneous mutational variation for fitness in Chlamydomonas
  • 批准号:
    BB/L00237X/1
  • 项目类别:
    Research Grant
  • 资助金额:
    $79.03万
  • 财政年份:
    2014
  • 负责人:
    Peter Keightley
  • 依托单位:
An integrated approach to understanding spontaneous mutation and natural selection in the Chlamydomonas genome
  • 批准号:
    BB/H006109/1
  • 项目类别:
    Research Grant
  • 资助金额:
    $96.54万
  • 财政年份:
    2010
  • 负责人:
    Peter Keightley
  • 依托单位:
Quantifying functional constraints in the mammalian genome
  • 批准号:
    BB/D015480/1
  • 项目类别:
    Research Grant
  • 资助金额:
    $70.13万
  • 财政年份:
    2006
  • 负责人:
    Peter Keightley
  • 依托单位:
国内基金
海外基金
LncRNA-lincUK介导邻近基因UK组蛋白修 饰调控褐飞虱繁殖力的机制研究
  • 批准号:
  • 项目类别:
    省市级项目
  • 资助金额:
    10.0万元
  • 批准年份:
    2025
  • 负责人:
    刘凯
  • 依托单位:
CREKA/rhPro-UK靶向载药微泡在腔内超声场下对静脉血栓的除栓作用及机理研究
EEID:US-UK-China: 新发禽流感病毒的演进与生态传播动力学的前瞻性研究
抗真菌药物UK-2A的组合生物合成研究
  • 批准号:
    31970054
  • 项目类别:
    面上项目
  • 资助金额:
    62.0万元
  • 批准年份:
    2019
  • 负责人:
    瞿旭东
  • 依托单位: