Training in Multi-scale Analysis of Biological Structure and Function
Training in Multi-scale Analysis of Biological Structure and Function
批准号:
10669614
负责人:
Andrew D. McCulloch
金额:
$28.76万
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-07-01 至 2024-06-30
中文摘要
项目摘要
这是生物结构多尺度分析中NIBIB研究生培训计划的更新
并在加州大学圣地亚哥分校工作。博士前实习生完全从
多尺度生物学专业的正式跨学科博士学位(接口研究生培训
计划“),其中包括来自10个排名很高的国内博士项目(生物工程,
生物科学、生物医学、化学和生物化学、机械和航空航天
工程、神经科学和物理学,材料科学和工程、化学工程和
自2015年加入纳米工程公司)。学生在第一年研究生学习结束时提出申请。这款T32
该计划汇集了40名培训教师,并支持了24名来自生物学院的学生
理科(2)、健康科学(9)、工程学(5)和物理科学(8)。它的目标是培养一名新的干部
能够跨越学科边界来解决跨越
从分子到生物体的生物组织。到目前为止,已有44名InterFaces学生毕业。13个是
这款T32的实习生。URM代表增加到29%
培训课程的一个主要特点是七门动手的研究生实验室课程,
向学生介绍在生物尺度上测量和分析生命系统的先进技术
从分子到整个有机体的组织。学生使用最先进的设施和
从质谱学到电子显微镜和磁共振成像的技术。科学的
关注生物结构和功能的多尺度分析反映了现代
生物医学发展和应用新的定量方法,从物理,工程,
从生物科学和健康科学到生物医学的综合问题。经常方案活动,包括
每两周一次的毕业生研讨会、年度研讨会和务虚会、课程开放参观和季度课程
会议,促进来自不同学科的学生和教师之间的互动。双师型
培训计划成功地促进了重要领域的新的跨学科合作,包括
发展生物学、神经科学和癌症、心血管疾病、诊断学和药物发现。
这份续签申请建议继续培养最多元化的学生群体,使其成为
结构一体化的多尺度生物功能分析。它将开发一门新的数据实验课程
多尺度生物学科学,为学员创建一个新的校友导师网络,并建立一个结构化的
共同指导未来学生的跨学科研究轮换。
英文摘要
Project Summary
This is a renewal of an NIBIB Graduate Training Program in Multi-Scale Analysis of Biological Structure
and Function at the University of California San Diego. Pre-doctoral trainees are drawn exclusively from a
formal Interdisciplinary Ph.D. specialization in Multi-Scale Biology (the “Interfaces Graduate Training
Program”), which includes students from 10 highly ranked participating home Ph.D. programs (Bioengineering,
Biological Sciences, Biomedical Sciences, Chemistry and Biochemistry, Mechanical and Aerospace
Engineering, Neurosciences and Physics, with Materials Science & Engineering, Chemical Engineering and
Nanoengineering joining since 2015). Students apply at the end of their first year of graduate studies. This T32
program brings together 40 training faculty and supported 24 students in the current period are from Biological
Sciences (2), Health Sciences (9), Engineering (5) and Physical Sciences (8). It’s goal is to train a new cadre
of scientist who can cross disciplinary boundaries to solve important biomedical problem that span scales of
biological organization from molecule to organism. To date 44 Interfaces students have graduated. 13 were
trainees on this T32. URM representation increased to 29%
A central feature of the training curriculum is seven hands-on graduate laboratory courses that
introduce students to advanced techniques for measuring and analyzing living systems at scales of biological
organization spanning from molecule to whole organism. Students use state-of-the-art facilities and
technologies from mass spectrometry to electron microscopy and magnetic resonance imaging. The scientific
focus on multi-scale analysis of biological structure and function reflects a fundamental challenge of modern
biomedical science in developing and applying novel quantitative approaches from the physical, engineering,
biological and health sciences to integrative problems in biomedicine. Regular program activities, including
bi-weekly graduate seminars, annual symposia and retreats, course open houses and quarterly program
meetings, promote interactions between students and faculty from different disciplines. The dual-mentored
training program is successful in promoting new interdisciplinary collaborations in important areas including
developmental biology, neuroscience and cancer, cardiovascular disease, diagnostics and drug discovery.
This renewal application proposes to continue to train the most diverse student body to be effective leaders in
structurally integrated multi-scale analysis of biological function. It will develop a new lab course in Data
Sciences for Multiscale Biology, create a new Alumni Mentor Network for trainees and a structured
co-mentored interdisciplinary research rotation for prospective students.
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Glycosylation and Crowded Membrane Effects on Influenza Neuraminidase Stability and Dynamics.
糖基化和拥挤膜对流感神经氨酸酶稳定性和动力学的影响。
DOI:
10.1101/2023.09.10.556910
发表时间:
2023
期刊:
bioRxiv : the preprint server for biology
影响因子:
--
作者:
[Seitz,Christian, Deveci,İlker, McCammon,JAndrew]
通讯作者:
McCammon,JAndrew
DOI:
10.1371/journal.pcbi.1010651
发表时间:
2022-10
期刊:
PLoS computational biology
影响因子:
4.3
作者:
[]
通讯作者:
DOI:
10.3389/fneng.2013.00004
发表时间:
2013
期刊:
Frontiers in neuroengineering
影响因子:
--
作者:
[Macdonald CL, Silva GA]
通讯作者:
Silva GA
DOI:
10.1016/j.neuroimage.2015.03.080
发表时间:
2015-08-01
期刊:
NeuroImage
影响因子:
5.7
作者:
[Simon AB, Buxton RB]
通讯作者:
Buxton RB
DOI:
10.1093/nar/gkw136
发表时间:
2016-06-02
期刊:
Nucleic acids research
影响因子:
14.9
作者:
[Ruff LE, Sapre AA, Plaut JS, De Maere E, Mortier C, Nguyen V, Separa K, Vandenbogaerde S, Vandewalle L, Esener SC, Messmer BT]
通讯作者:
Messmer BT
共 37 条
Systems Biology of Hypertrophic Heart Disease from Molecular Pathways to Organ System
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批准号:9302154
-
项目类别:
-
资助金额:$51.35万
-
财政年份:2017
-
负责人:Andrew D. McCulloch
-
依托单位:
The Cardiac Atlas Project
-
批准号:8786602
-
项目类别:
-
资助金额:$45.6万
-
财政年份:2014
-
负责人:Andrew D. McCulloch
-
依托单位:
The Cardiac Atlas Project
-
批准号:10665560
-
项目类别:
-
资助金额:$62.36万
-
财政年份:2014
-
负责人:Andrew D. McCulloch
-
依托单位:
The Cardiac Atlas Project
-
批准号:10435422
-
项目类别:
-
资助金额:$62.38万
-
财政年份:2014
-
负责人:Andrew D. McCulloch
-
依托单位:
The Cardiac Atlas Project
-
批准号:8624979
-
项目类别:
-
资助金额:$47.2万
-
财政年份:2014
-
负责人:Andrew D. McCulloch
-
依托单位:
The Cardiac Atlas Project
-
批准号:10186472
-
项目类别:
-
资助金额:$62.39万
-
财政年份:2014
-
负责人:Andrew D. McCulloch
-
依托单位:
Modeling Cytosolic and Nuclear Ca2+ and IP3 Signaling in Ventricular Myocytes
-
批准号:8444915
-
项目类别:
-
资助金额:$7.75万
-
财政年份:2013
-
负责人:Andrew D. McCulloch
-
依托单位:
ATRIAL FIBRILLATION AND ALTERNANS OF ACTION POTENTIAL DURATION
-
批准号:8362804
-
项目类别:
-
资助金额:$3.0万
-
财政年份:2011
-
负责人:Andrew D. McCulloch
-
依托单位:
MECHANOELECTRIC FEEDBACK IN CARDIAC DEFIBRILLATION
-
批准号:8362802
-
项目类别:
-
资助金额:$3.0万
-
财政年份:2011
-
负责人:Andrew D. McCulloch
-
依托单位:
SIMULATION OF CORONARY ARTERY BYPASS GRAFT AND SURGICAL VENTRICULAR RESTORATION
-
批准号:8362806
-
项目类别:
-
资助金额:$2.0万
-
财政年份:2011
-
负责人:Andrew D. McCulloch
-
依托单位:
THE ROLE OF ANATOMIC STRUCTURES IN VENTRICULAR FIBRILLATION
-
批准号:8362803
-
项目类别:
-
资助金额:$3.0万
-
财政年份:2011
-
负责人:Andrew D. McCulloch
-
依托单位:
MULTISCALE MODELING ENVIRONMENT FOR TISSUE AND ORGAN BIOPHYSICS
-
批准号:8362788
-
项目类别:
-
资助金额:$29.99万
-
财政年份:2011
-
负责人:Andrew D. McCulloch
-
依托单位:
MULTISCALE MODELING ENVIRONMENT FOR TISSUE AND ORGAN BIOPHYSICS
-
批准号:8169337
-
项目类别:
-
资助金额:$26.8万
-
财政年份:2010
-
负责人:Andrew D. McCulloch
-
依托单位:
Systems Biology Core
-
批准号:8001452
-
项目类别:
-
资助金额:$37.68万
-
财政年份:2010
-
负责人:Andrew D. McCulloch
-
依托单位:
Multi-Scale Modeling of the Failing Heart for Cardiac Rysynchronization Therapy
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批准号:7920240
-
项目类别:
-
资助金额:$35.82万
-
财政年份:2009
-
负责人:Andrew D. McCulloch
-
依托单位:
Multi-Scale Modeling of the Failing Heart for Cardiac Rysynchronization Therapy
-
批准号:7689557
-
项目类别:
-
资助金额:$35.9万
-
财政年份:2009
-
负责人:Andrew D. McCulloch
-
依托单位:
Bioengineering Core for Cellular and Tissue Models
-
批准号:7905102
-
项目类别:
-
资助金额:$31.07万
-
财政年份:2009
-
负责人:Andrew D. McCulloch
-
依托单位:
STRUCTURALLY & FUNCTIONALLY INTEGRATED MODELING OF CELL & ORGAN BIOPHYSICS
-
批准号:7955221
-
项目类别:
-
资助金额:$19.16万
-
财政年份:2009
-
负责人:Andrew D. McCulloch
-
依托单位:
Training in Multi-Scale Analysis of Biological Structure and Function
-
批准号:7797609
-
项目类别:
-
资助金额:$20.47万
-
财政年份:2009
-
负责人:Andrew D. McCulloch
-
依托单位:
Training in Multi-Scale Analysis of Biological Structure and Function
-
批准号:8499301
-
项目类别:
-
资助金额:$21.19万
-
财政年份:2009
-
负责人:Andrew D. McCulloch
-
依托单位:
海外基金