III-COR-Medium: Providing Provenance through Workflows and Database Transformations
III-COR-Medium:通过工作流程和数据库转换提供来源
基本信息
- 批准号:0803524
- 负责人:
- 金额:$ 81.66万
- 依托单位:
- 依托单位国家:美国
- 项目类别:Standard Grant
- 财政年份:2008
- 资助国家:美国
- 起止时间:2008-08-01 至 2014-07-31
- 项目状态:已结题
- 来源:
- 关键词:
项目摘要
Data provenance is a fundamental issue in the processing of scientific information and beyond. Two lines of research have been pursued in recent years with direct bearing on the issues of data provenance. In one of them, provenance in workflows, the emphasis is on extracting provenance from logs of events marking the execution of different modules to various intial and derived datasets. In the other line of research, provenance in databases, the emphasis is on the propagation of provenance through the operators that make up database views, or on propagation of provenance through copy/cut-and-paste operations within and among databases. These two bodies of work employ different techniques and at first glance their results appear quite different. However, in many scientific applications, database manipulations co-exist with the execution of workflow modules, and the provenance of the resulting data should integrate both kinds of processing into a usable paradigm. By analyzing the work on data provenance in workflows and in databases, the PIs identify what they believe are the main difficulties in unifying and integrating these two different kinds of data provenance:(1) the lack of a data model that is rich enough to capture the interaction between the structure of the data and the structure of the workflow; and(2) the lack of a high-level specification framework in which database operators and workflow modules can be treated uniformly. In this project, the PIs aim to overcome these difficulties and thus provide concepts and tools that allow a truly comprehensive approach to the provenace of scientific data. The project's approach relies on a data model that supports nested collections and on a functional language approach to workflow specification. Based on this, the project aims to deliver a framework and tools for defining, managing and querying data provenance in complexscientific workflows that include database manipulations. The project is expected to impact bioinformatics (through interdisciplinary collaborations in the Penn Center for Bioinformatics and the Penn Genome Frontiers Institute) and phyloinformatics (through contributions to the NSF AToL program) as well as ongoing standardization work on provenance in workflows and in the business processes (eg., BPEL) community.The results of this project are disseminated as publications, through direct collaborations and through the project website: http://db.cis.upenn.edu/research/UNIPROVE.html.
数据来源是科学信息处理及其他方面的一个基本问题。近年来进行了两方面的研究,直接关系到数据来源问题。在其中之一,工作流中的起源,重点是从标记不同模块执行到各种初始和派生数据集的事件日志中提取起源。在另一个研究领域,数据库中的出处,重点是通过构成数据库视图的操作符传播出处,或者通过数据库内和数据库之间的复制/剪切和粘贴操作传播出处。 这两个机构的工作采用不同的技术,乍一看,他们的结果似乎完全不同。然而,在许多科学应用中,数据库操作与工作流模块的执行共存,并且所得到的数据的出处应该将这两种处理集成到可用的范例中。通过分析工作流和数据库中的数据起源,PI确定了他们认为统一和集成这两种不同类型的数据起源的主要困难:(1)缺乏足够丰富的数据模型来捕获数据结构和工作流结构之间的交互;(2)缺乏一个高级别的规范框架,其中数据库操作员和工作流模块可以统一处理。在这个项目中,项目执行人的目标是克服这些困难,从而提供概念和工具,使科学数据的出处真正全面的方法。该项目的方法依赖于支持嵌套集合的数据模型和用于工作流规范的函数式语言方法。在此基础上,该项目旨在提供一个框架和工具,用于在包括数据库操作的复杂科学工作流程中定义,管理和查询数据出处。该项目预计将影响生物信息学(通过宾夕法尼亚大学生物信息学中心和宾夕法尼亚大学基因组前沿研究所的跨学科合作)和生物信息学(通过对NSF AToL计划的贡献)以及正在进行的工作流程和业务流程中的来源标准化工作(例如,该项目的成果通过直接合作和项目网站http://db.cis.upenn.edu/research/UNIPROVE.html作为出版物传播。
项目成果
期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
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Susan Davidson其他文献
Cause and Effect: The Relationship Between Acne and Self-Esteem in the Adolescent Years
- DOI:
10.1016/j.nurpra.2008.01.021 - 发表时间:
2008-09-01 - 期刊:
- 影响因子:
- 作者:
Sandra L. Hedden;Susan Davidson;Christine B. Smith - 通讯作者:
Christine B. Smith
"Conversations: Rauschenberg in China"
《对话:劳森伯格在中国》
- DOI:
- 发表时间:
2016 - 期刊:
- 影响因子:0
- 作者:
Hiroko Ikegami;David White;Helen Hsu;Susan Davidson - 通讯作者:
Susan Davidson
Proceedings of Patient Reported Outcome Measure’s (PROMs) Conference Oxford 2017: Advances in Patient Reported Outcomes Research
- DOI:
10.1186/s12955-017-0757-y - 发表时间:
2017-10-01 - 期刊:
- 影响因子:3.400
- 作者:
Galina Velikova;Jose M. Valderas;Caroline Potter;Laurie Batchelder;Christine A’Court;Matthew Baker;Jennifer Bostock;Angela Coulter;Ray Fitzpatrick;Julien Forder;Diane Fox;Louise Geneen;Elizabeth Gibbons;Crispin Jenkinson;Karen Jones;Laura Kelly;Michele Peters;Brendan Mulhern;Alexander Labeit;Donna Rowen;Keith Meadows;Jackie Elliott;John Brazier;Emma Knowles;Anju Keetharuth;John Brazier;Janice Connell;Jill Carlton;Lizzie Taylor Buck;Thomas Ricketts;Michael Barkham;Pushpendra Goswami;Sam Salek;Tatyana Ionova;Esther Oliva;Adele K. Fielding;Marina Karakantza;Saad Al-Ismail;Graham P. Collins;Stewart McConnell;Catherine Langton;Daniel M. Jennings;Roger Else;Jonathan Kell;Helen Ward;Sophie Day;Elizabeth Lumley;Patrick Phillips;Rosie Duncan;Helen Buckley-Woods;Ahmed Aber;Gerogina Jones;Jonathan Michaels;Ian Porter;Jaheeda Gangannagaripalli;Antoinette Davey;Ignacio Ricci-Cabello;Kirstie Haywood;Stine Thestrup Hansen;Jose Valderas;Deb Roberts;Anil Gumber;Bélène Podmore;Andrew Hutchings;Jan van der Meulen;Ajay Aggarwal;Sujith Konan;Andrew Price;William Jackson;Nick Bottomley;Michael Philiips;Toby Knightley-Day;David Beard;Elizabeth Gibbons;Ray Fitzpatrick;Joanne Greenhalgh;Kate Gooding;Elizabeth Gibbons;Chema Valderas;Judy Wright;Sonia Dalkin;David Meads;Nick Black;Carol Fawkes;Robert Froud;Dawn Carnes;Andrew Price;Jonathan Cook;Helen Dakin;James Smith;Sujin Kang;David Beard;Catrin Griffiths;Ella Guest;Diana Harcourt;Mairead Murphy;Sandra Hollinghurst;Chris Salisbury;Jill Carlton;Jackie Elliott;Donna Rowen;Anqi Gao;Andrew Price;David Beard;Agnieszka Lemanska;Tao Chen;David P. Dearnaley;Rajesh Jena;Matthew Sydes;Sara Faithfull;A. E. Ades;Daphne Kounali;Guobing Lu;Ines Rombach;Alastair Gray;Crispin Jenkinson;Oliver Rivero-Arias;Patricia Holch;Marie Holmes;Zoe Rodgers;Sarah Dickinson;Beverly Clayton;Susan Davidson;Jacqui Routledge;Julia Glennon;Ann M. Henry;Kevin Franks;Galina Velikova;Roma Maguire;Lisa McCann;Teresa Young;Jo Armes;Jenny Harris;Christine Miaskowski;Grigorios Kotronoulas;Morven Miller;Emma Ream;Elizabeth Patiraki;Alexander Geiger;Geir V. Berg;Adrian Flowerday;Peter Donnan;Paul McCrone;Kathi Apostolidis;Patricia Fox;Eileen Furlong;Nora Kearney;Chris Gibbons;Felix Fischer;Chris Gibbons;Joel Coste;Jose Valderas Martinez;Matthias Rose;Alain Leplege;Sarah Shingler;Natalie Aldhouse;Tamara Al-Zubeidi;Andrew Trigg;Helen Kitchen;Antoinette Davey;Ian Porter;Colin Green;Jose M. Valderas;Joanna Coast;Sarah Smith;Jolijn Hendriks;Nick Black;Koonal Shah;Oliver Rivero-Arias;Juan-Manuel Ramos-Goni;Simone Kreimeier;Mike Herdman;Nancy Devlin;Aureliano Paolo Finch;John E. Brazier;Clara Mukuria;Bernarda Zamora;David Parkin;Yan Feng;Andrew Bateman;Mike Herdman;Nancy Devlin;Thomas Patton;Nils Gutacker;Koonal Shah - 通讯作者:
Koonal Shah
世界建築史15講』
世界建筑史15讲》
- DOI:
- 发表时间:
2019 - 期刊:
- 影响因子:0
- 作者:
Hiroko Ikegami;David White;Helen Hsu;Susan Davidson;加治屋健司;Hiroko Ikegami;辻泰岳 - 通讯作者:
辻泰岳
Past Disquiet: Artists, International Solidarity and Museums-in-Exile
过去的不安:艺术家、国际团结和流亡博物馆
- DOI:
- 发表时间:
2018 - 期刊:
- 影响因子:0
- 作者:
Hiroko Ikegami;David White;Helen Hsu;Susan Davidson;加治屋健司;Hiroko Ikegami;辻泰岳;Hiroko Ikegami;Izumi Nakajima - 通讯作者:
Izumi Nakajima
Susan Davidson的其他文献
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{{ truncateString('Susan Davidson', 18)}}的其他基金
III: Medium: Collaborative Research: Citing Structured and Evolving Data
III:媒介:协作研究:引用结构化和不断变化的数据
- 批准号:
1302212 - 财政年份:2013
- 资助金额:
$ 81.66万 - 项目类别:
Standard Grant
BPC-DP: Penn COMP-ACT: A College Service Learning Course to Promote and Increase COMPutational Thinking and ACTivities in Afterschool and Summer Programs
BPC-DP:宾夕法尼亚大学 COMP-ACT:大学服务学习课程,旨在促进和提高课后和暑期项目中的计算思维和活动
- 批准号:
0940511 - 财政年份:2010
- 资助金额:
$ 81.66万 - 项目类别:
Standard Grant
SEIII: Workshop on Information Integration
SEIII:信息集成研讨会
- 批准号:
0632541 - 财政年份:2006
- 资助金额:
$ 81.66万 - 项目类别:
Standard Grant
Collaborative Research: SEI+II ProtocolDB: Archiving and Querying Scientific Protocols, Data and Provenance
合作研究:SEI II ProtocolDB:归档和查询科学协议、数据和来源
- 批准号:
0612177 - 财政年份:2006
- 资助金额:
$ 81.66万 - 项目类别:
Standard Grant
Preserving Constraints in XML Data Exchange
保留 XML 数据交换中的约束
- 批准号:
0415810 - 财政年份:2005
- 资助金额:
$ 81.66万 - 项目类别:
Standard Grant
II: Data Cooperatives: Rapid and Incremental Data Sharing with Applications to Bioinformatics
II:数据合作社:快速增量数据共享及其在生物信息学中的应用
- 批准号:
0513778 - 财政年份:2005
- 资助金额:
$ 81.66万 - 项目类别:
Standard Grant
A Deterministic Model for Semistructured and Structured Data
半结构化和结构化数据的确定性模型
- 批准号:
9977408 - 财政年份:1999
- 资助金额:
$ 81.66万 - 项目类别:
Standard Grant
Mediated Access to Biological Databases and Applications
对生物数据库和应用程序的介导访问
- 批准号:
9402292 - 财政年份:1994
- 资助金额:
$ 81.66万 - 项目类别:
Continuing Grant
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