Collaborative Research--Microscopic Islands: Modeling the Theory of Island Biogeography for Aquatic Pathogens Colonizing Marine Aggregates

合作研究--微观岛屿:为海洋聚集体定殖的水生病原体的岛屿生物地理学理论建模

基本信息

  • 批准号:
    0914347
  • 负责人:
  • 金额:
    $ 45.17万
  • 依托单位:
  • 依托单位国家:
    美国
  • 项目类别:
    Standard Grant
  • 财政年份:
    2009
  • 资助国家:
    美国
  • 起止时间:
    2009-09-01 至 2015-08-31
  • 项目状态:
    已结题

项目摘要

The theory of island biogeography, seminal to modern ecological thinking, has been invoked hundreds of times to explain colonization sequences and species richness on "islands" of many sizes and in many locations. These applications have overwhelmingly focused on macro-organisms (among them lizards, birds, and beetles) and practically ignored microorganisms. In this project investigators at four U.S. research universities -- Old Dominion University, University of Georgia, University of Minnesota at Duluth, and University of Connecticut -- will apply the theory more provocatively: to infectious disease ecology. They argue that organic-rich marine and freshwater aggregates (synonyms include: marine snow, freshwater snow, organic detritus, and bioflocs) serve as "microscopic islands" for bacteria in aquatic environments. The theory?s relevance in this context will be tested through development of analytical models parameterized by empirical studies in both field and laboratory. Using a three-step approach, the research team (microbial ecologists, infectious-disease modeler, shellfish biologist/ physiologist) together will: (1) Design and experimentally test an analytical model of island biogeography applied to individual aggregates ("islands") to predict bacterial species richness as a function of aggregate size and distance from a point source of pathogens (Species richness of marine aggregates); (2) Use the outputs from the species-richness model to construct and experimentally analyze a second mathematical model that considers the persistence of pathogenic species within the microbial communities of aggregates. The effects, if any, of species richness on persistence will also be determined (Pathogen persistence in marine aggregates); and (3) Apply information from the species-richness model and the pathogen-persistence model to evaluate links between marine aggregates and public health with an agent-based simulation model. The long-term goal of the principal investigators is to bring a community-level approach to studies of infectious diseases in aquatic environments. The broader impacts of this proposed research are many. Graduate students at all four participating universities will be trained, and two post-doctoral researchers will be supported and mentored. In addition, ambitious outreach efforts will develop innovative, inquiry-based teaching materials for students from grades K-12. These materials advocate basic ecological principles of infectious diseases, helping to fill a void in resources available for this topic. Between them, these institutions host more than 30,000 school children and educators annually, providing the NSF Ecology of Infectious Diseases program an immense and diverse audience for disseminating this project's interactive demonstrations and activities and in so doing, enhance the public understanding of science.
对现代生态学思想具有开创性意义的岛屿生物地理学理论已被数百次用来解释在许多大小和许多地点的“岛屿”上的殖民序列和物种丰富性。这些应用压倒性地集中在大型生物(其中包括蜥蜴、鸟类和甲虫)上,而实际上忽视了微生物。在这个项目中,四所美国研究型大学--老道明大学、佐治亚大学、明尼苏达大学德卢斯分校和康涅狄格大学--的研究人员将更具挑衅性地将这一理论应用于传染病生态学。他们认为,富含有机物质的海洋和淡水聚集体(同义词包括:海洋雪、淡水雪、有机碎屑和生物群落)是水环境中细菌的“微型孤岛”。在这一背景下,理论?S的相关性将通过现场和实验室的实证研究参数化的分析模型的开发来检验。使用三步法,研究小组(微生物生态学家、传染病模型师、贝类生物学家/生理学家)将共同:(1)设计并实验测试应用于单个聚集体(“岛屿”)的岛屿生物地理学分析模型,以预测细菌物种丰富度作为聚集体大小和与病原体点源(海洋聚集体的物种丰富度)的距离的函数;(2)使用物种丰富度模型的输出来构建和实验分析第二个数学模型,该模型考虑了聚集体微生物群落内病原物种的持久性。还将确定物种丰富度对持久性的影响(病原体在海洋聚集体中的持久性);以及(3)应用物种丰富度模型和病原体-持久性模型中的信息,通过基于代理人的模拟模型评估海洋聚集体与公共健康之间的联系。主要研究人员的长期目标是将社区一级的方法引入水生环境中的传染病研究。这项拟议研究的更广泛影响是多方面的。所有四所参与大学的研究生都将接受培训,两名博士后研究人员将得到支持和指导。此外,雄心勃勃的外展工作将为K-12年级的学生开发创新的探究式教学材料。这些材料倡导传染病的基本生态学原理,有助于填补这一主题可用资源的空白。这些机构每年接待超过30,000名学童和教育工作者,为NSF传染病生态学计划提供了一个庞大和多样化的受众,以传播该项目的互动演示和活动,并通过这样做,增进公众对科学的理解。

项目成果

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John Drake其他文献

F33. EXPLORING DIFFERENTIAL EXPRESSION OF NEURONAL PIRNAS IN MAJOR DEPRESSION SUBJECTS IN A LARGE POST MORTEM BRAIN SAMPLE
F33. 探索大型死后大脑样本中重度抑郁症受试者神经元 PIRNAs 的差异表达
  • DOI:
    10.1016/j.euroneuro.2024.08.444
  • 发表时间:
    2024-10-01
  • 期刊:
  • 影响因子:
    6.700
  • 作者:
    Z. Nathan Taylor;John Drake;Allie Denham;Joo Heon Shin;Thomas Hyde;Vladimir Vladimirov
  • 通讯作者:
    Vladimir Vladimirov
T30. LEVERAGING WHOLE GENOME SEQUENCING OF FAMILIES TO DISCOVER RARE VARIANTS ASSOCIATED WITH BIPOLAR DISORDER
T30. 利用家庭全基因组测序发现与双相情感障碍相关的罕见变异
  • DOI:
    10.1016/j.euroneuro.2023.08.316
  • 发表时间:
    2023-10-01
  • 期刊:
  • 影响因子:
    6.700
  • 作者:
    Hamed Kazemi;John Drake;Tim Bigdeli;Silviu Bacanu;Kelly Benke;Brion Maher;Michele Pato;James Knowles;Steve McCarroll;Celia Carvalho;Helena Medeiros;Rute Ferreira;Vladimir Vladimirov;Ayman Fanous
  • 通讯作者:
    Ayman Fanous
Egress Online: Towards Leveraging Massively, Multiplayer Environments for Evacuation Studies
Egress Online:利用大规模、多人环境进行疏散研究
  • DOI:
  • 发表时间:
    2012
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Aline Normoyle;John Drake;A. Safonova
  • 通讯作者:
    A. Safonova
Correction to: Bone metastases from chondroblastoma: a rare pattern of metastatic disease in an adult
  • DOI:
    10.1007/s00256-023-04520-3
  • 发表时间:
    2023-11-22
  • 期刊:
  • 影响因子:
    2.200
  • 作者:
    Jennifer Murphy;Anish Patel;Simon Hughes;Petr Rehousek;John Drake;Vaiyapuri Sumathi;Rajesh Botchu;A. Mark Davies
  • 通讯作者:
    A. Mark Davies
F40. MAXIMIZING PERFORMANCE AND ELUCIDATING LIMITATIONS OF GENE EXPRESSION IMPUTATION IN THE ANTERIOR CINGULATE CORTEX
F40. 最大化前扣带回皮质中基因表达插补的性能并阐明其局限性
  • DOI:
    10.1016/j.euroneuro.2024.08.451
  • 发表时间:
    2024-10-01
  • 期刊:
  • 影响因子:
    6.700
  • 作者:
    John Drake;Zachary N. Taylor;Allie Denham;Silviu-Alin Bacanu;Joo Heon Shin;Thomas M. Hyde;Vladimir Vladimirov
  • 通讯作者:
    Vladimir Vladimirov

John Drake的其他文献

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{{ truncateString('John Drake', 18)}}的其他基金

PIPP Phase I: Heterogeneous Model Integration for Infectious Disease Intelligence
PIPP 第一阶段:传染病情报的异构模型集成
  • 批准号:
    2200158
  • 财政年份:
    2022
  • 资助金额:
    $ 45.17万
  • 项目类别:
    Standard Grant
RAPID: Dynamical Modeling of COVID-19
RAPID:COVID-19 的动态建模
  • 批准号:
    2027786
  • 财政年份:
    2020
  • 资助金额:
    $ 45.17万
  • 项目类别:
    Standard Grant
RAPID Collaborative proposal: Spatial dynamics of COVID-19
RAPID 合作提案:COVID-19 的空间动态
  • 批准号:
    2028136
  • 财政年份:
    2020
  • 资助金额:
    $ 45.17万
  • 项目类别:
    Standard Grant
Meeting: Special Symposium: Population Biology of Vector-borne Diseases, University of Georgia, February 24, 2018
会议:特别研讨会:媒介传播疾病的群体生物学,佐治亚大学,2018 年 2 月 24 日
  • 批准号:
    1820544
  • 财政年份:
    2018
  • 资助金额:
    $ 45.17万
  • 项目类别:
    Standard Grant
REU Site: Population Biology of Infectious Diseases
REU 网站:传染病群体生物学
  • 批准号:
    1659683
  • 财政年份:
    2017
  • 资助金额:
    $ 45.17万
  • 项目类别:
    Continuing Grant
REU Site: Population Biology of Infectious Diseases
REU 网站:传染病群体生物学
  • 批准号:
    1156707
  • 财政年份:
    2012
  • 资助金额:
    $ 45.17万
  • 项目类别:
    Continuing Grant
Emerging Urban Vector-Borne Disease: West Nile Virus in New York City (1999-2006)
新兴城市媒介传播疾病:纽约市的西尼罗河病毒(1999-2006)
  • 批准号:
    0723601
  • 财政年份:
    2007
  • 资助金额:
    $ 45.17万
  • 项目类别:
    Standard Grant
Development of Integrated Materials For Laboratory Studies Of New England Petrology
新英格兰岩石学实验室研究综合材料的开发
  • 批准号:
    7900043
  • 财政年份:
    1979
  • 资助金额:
    $ 45.17万
  • 项目类别:
    Standard Grant

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