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CI-ADDO-NEW: Stan, Scalable Software for Bayesian Modeling

CI-ADDO-NEW: Stan, Scalable Software for Bayesian Modeling
CI-ADDO-NEW:Stan,用于贝叶斯建模的可扩展软件
批准号:
1205516
负责人:
Andrew Gelman
金额:
$49.96万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2012
资助国家:
美国
项目状态:
已结题
起止时间:
2012-06-01 至 2015-05-31
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项目摘要

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中文摘要
翻译
该奖项旨在设计、编码、记录、测试、传播和维护STAN,这是一个可扩展的开源软件框架和编译器,用于高效和可伸缩的贝叶斯统计建模。STAN是用于开发贝叶斯统计模型的可扩展、开源、跨平台的软件框架。贝叶斯建模的第一步是为所有感兴趣的量建立一个全概率模型。Stan通过提供一种可表达且可扩展的特定于领域的编程语言来指定概率模型,从而简化了这一过程。通过将模型规范编译成可执行代码,Stan完全自动化了贝叶斯推理的第二步,根据观测数据计算未观察量的概率,如模型参数和未来观测值。第三步涉及评估模型与数据的拟合及其对未知数据的预测。当模型易于编码且推理快速且自动计算时,很容易迭代规范、拟合和评估步骤以完善科学模型。Stan在算法和实现细节方面都改进了现有的技术水平。Stan模型没有像它的前辈那样被即时解释,而是被编译成C++代码,这极大地提高了可伸缩性和效率。Stan为统计建模所需的函数提供了完整的算法差异库。这种方法将微积分中的链式规则应用到计算概率函数的程序中,以便高效而准确地计算导数(独立于维度的计算函数所需时间的一小部分)。这使得Stan可以完全自动化模型拟合阶段,只需在Stan的建模语言中指定概率函数。为了最大限度地提高Stan对科学界的可访问性,它使用符合标准的C++进行编码,以便它可以在Windows、Macintosh和Unix/Linux下运行。为了更轻松地运行Stan,可以从R、MatLab和Python这三个最流行的数值分析平台调用它,包括探索和绘图。
英文摘要
This award is to design, code, document, test, dissememinate, and maintain Stan,an extensibleopen-source software framework and compiler for efficient and scalable Bayesian statistical modeling.Stan is an extensible, open-source, cross-platform software framework for developing Bayesian statisticalmodels. The first step in Bayesian modeling is setting up a full probability model for all quantities ofinterest. Stan facilitates this process by providing an expressive and extensible domain-specificprogramming language for specifying probabilistic models. By compiling a model specification intoexecutable code, Stan fully automates the second step of Bayesian inference, calculating the probabilitiesof unobserved quantities, such as model parameters and future observations, conditional on observed data.The third step involves evaluating the fit of the model to the data and its predictions for unseen data.When the model is easy to encode and inferences are fast and automatic to compute, it is easy to iteratethe specification, fit and evaluation steps in order to refine the scientific model.Stan improves on the existing state of the art in both algorithmic and implementation details. Rather thanbeing interpreted on the fly like its predecessors, Stan models are compiled to C++ code, whichdramatically improves both scalability and efficiency. Stan provides a full algorithmic differentiation library for the functions required for statistical modeling. This method applies the chain rule from calculus to the program computing the probability function in order to calculate derivatives efficiently and accurately (a small multiple of the time taken to compute thefunction, independently of dimensionality). This allows Stan to fully automate the model fitting stagegiven only a specification of the probability function in Stan's modeling language.To maximize Stan's accessibility to the scientific community, it is being coded using standards-compliantC++, so that it will run under Windows, Macintosh, and Unix/Linux. To make running Stan even easier,it is callable from R, MATLAB, and Python, the three most popular platforms for numerical analysis,including exploration and plotting.
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Scalable Bayesian regression: Analytical and numerical tools for efficient Bayesian analysis in the large data regime
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  • 资助金额:
    $29.99万
  • 财政年份:
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  • 负责人:
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RAPID: Flexible, Efficient, and Available Bayesian Computation for Epidemic Models
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Collaborative Research: PPoSS: Planning: Scalable Systems for Probabilistic Programming
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    2029022
  • 项目类别:
    Standard Grant
  • 资助金额:
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    2020
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    Andrew Gelman
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RIDIR: Collaborative Research: Bayesian analytical tools to improve survey estimates for subpopulations and small areas
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  • 项目类别:
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  • 资助金额:
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  • 财政年份:
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  • 负责人:
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  • 依托单位:
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