UNS: Design of Self-Assembling Peptides and their Conjugates as Amyloid Inhibitors

UNS：作为淀粉样蛋白抑制剂的自组装肽及其缀合物的设计

• 批准号: 1510099
• 负责人: Jie Zheng
• 金额: $ 29.01万
• 依托单位: University of Akron
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2015
• 资助国家: 美国
• 起止时间: 2015-09-15 至 2019-08-31
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=1510099&HistoricalAwards=false
• 关键词: UNS; Design; Self; Assembling; Peptides

PI: Zheng, Jie Proposal Number: 1510099With the aging population, Alzheimer's (AD) and other age-related neurodegenerative diseases will continue to impact more lives with no cure available. Aggregation of amyloid-beta (Abeta) peptides is thought to contribute to dysfunction and loss of nerve cells in AD, so inhibition of Abeta aggregation holds considerable promise for the development of new therapies for AD. However, the existing inhibitors are not potent enough to be used as effective treatments. This project aims to develop a new class of peptide-nanoparticle inhibitors of improved biocompatibility, enzymatic resistance, and delivery properties against Abeta aggregation and toxicity. The objectives of this research are to (i) develop a new class of beta-sheet-forming self-assembling peptides (SAPs) and SAP-nanoparticle conjugates as amyloid-beta (Abeta) inhibitors with improved inhibitory ability, enzymatic degradation, and blood-brain barrier (BBB) permeability; and (ii) establish practical design principles that can consistently explain the sequence/structural dependence of functional interactions between SAP derivatives and Abeta peptides on amyloid aggregation, toxicity, and inhibition. To achieve these goals, de novo computation-aided design tools will be first developed to screen and identify SAPs from a large pool of peptide library, followed by experimental determination of the role of SAPs in Abeta inhibition and Abeta-induced cell toxicity. Then, SAP-nanoparticle conjugates will be developed to solve the issues of toxicity, degradation, and BBB permeation of SAPs by mutually controlling interfacial properties of both nanoparticles and conjugated peptides. Finally, a multiscale computational platform will be developed to integrate experimental and computational data to establish the sequence/structure-dependent relationship among aggregation property, membrane permeability, and cell toxicity of SAPs, and finally help to determine a set of rules for iterative design of SAP-derived inhibitors with tunable sequence and structural properties. The peptide inhibitors could be potentially useful for other neurodegenerative diseases, and peptide materials can also represent new protein-based self-assembled nano-/bio-materials for other biomedical applications. The interdisciplinary nature of the project provides a unique opportunity to train and educate all-level students to learn the concepts and tools in structural biology, bioinformatics, and engineering design. The knowledge derived from the proposal will be disseminated through undergraduate/graduate courses, high-impact journals, conference presentations, summer workshops/internships, and other outreach activities.

主要研究者：郑杰提案号：1510099随着人口老龄化，阿尔茨海默病（AD）和其他与年龄相关的神经退行性疾病将继续影响更多的生命，无法治愈。淀粉样蛋白-β（Abeta）肽的聚集被认为有助于AD中神经细胞的功能障碍和损失，因此抑制Abeta聚集对于开发AD的新疗法具有相当大的希望。然而，现有的抑制剂不足以用作有效的治疗。该项目旨在开发一类新的肽-纳米颗粒抑制剂，其具有改善的生物相容性、酶抗性和针对Abeta聚集和毒性的递送特性。 本研究的目的是（i）开发一类新的β折叠形成自组装肽（SAP）和SAP-纳米颗粒缀合物作为淀粉样蛋白β（Abeta）抑制剂，其具有改善的抑制能力、酶降解和血脑屏障（BBB）通透性;及（ii）建立实际的设计原则，可以始终如一地解释序列/SAP衍生物和Abeta肽之间功能性相互作用对淀粉样蛋白聚集、毒性和抑制的结构依赖性。为了实现这些目标，将首先开发从头计算辅助设计工具，以从大量肽库中筛选和鉴定SAP，然后实验确定SAP在Abeta抑制和Abeta诱导的细胞毒性中的作用。然后，SAP-纳米颗粒缀合物将被开发以通过相互控制纳米颗粒和缀合肽两者的界面性质来解决SAP的毒性、降解和BBB渗透的问题。最后，将开发一个多尺度计算平台，整合实验和计算数据，建立SAP聚集特性、膜渗透性和细胞毒性之间的序列/结构依赖关系，最终帮助确定一套迭代设计SAP衍生抑制剂的规则具有可调的序列和结构特性。 肽抑制剂可能对其他神经退行性疾病有潜在的用途，肽材料也可以代表用于其他生物医学应用的新的基于蛋白质的自组装纳米/生物材料。 该项目的跨学科性质提供了一个独特的机会，培养和教育所有层次的学生学习结构生物学，生物信息学和工程设计的概念和工具。从提案中获得的知识将通过本科生/研究生课程、高影响力期刊、会议演讲、夏季讲习班/实习和其他外联活动传播。