Research Infrastructure: MRI: Acquisition of a Big Data HPC Cluster for Interdisciplinary Research and Training
Research Infrastructure: MRI: Acquisition of a Big Data HPC Cluster for Interdisciplinary Research and Training
批准号:
2215705
负责人:
Thomas Girke
金额:
$66.0万
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2022
资助国家:
美国
项目状态:
未结题
起止时间:
2022-09-01 至 2025-08-31
中文摘要
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英文摘要
An award is made to the University of California, Riverside (UCR) to acquire a Big Data High-Performance Computing (BD-HPC) cluster designed to enable novel and transformative research, outreach and training activities that are highly relevant to the environment and society. The system will be managed by UCR's HPC Center (HPCC) that serves a broad and diverse user population distributed across colleges and departments. As a highly shared resource, the instrument will enable a large number of NSF-funded programs, including those aiming to improve practices in agriculture, environmental protection, technology development and industry. Extensive educational and training activities are integrated to disseminate multidisciplinary concepts of Big Data Science. These outreach components will educate the public about the impact of Big Data Science on the environment, economy and society. The HPCC supports many undergraduate and graduate classes in a wide range of disciplines. Its resources are also instrumental for the development of new courses and programs in various data science areas. A high percentage of students in these classes and programs are from populations that are traditionally underrepresented in STEM disciplines. The availability of adequate computing and its beneficial impact on educational programs will attract outstanding students to computational and quantitative undergraduate and graduate programs. Combined with UCR’s diverse ethnicity and research mission, this investment will benefit a wide array of translational research directions and technology-based economic development initiatives.The new BD-HPC cluster will enable novel research that cannot be performed on UCR’s current research computing infrastructure or community cyberinfrastructure (CI), while also offering sufficient capacity to ensure support of ongoing research with greatly improved performance. Both current and new research addresses fundamental problems in a highly interdisciplinary environment bridging a broad array of science and engineering disciplines in basic and translational research. Grand challenge questions asked include: How do genetic and population dynamics determine phenotypic and evolutionary diversity? How can large-scale precision data be translated into improved stress and pathogen tolerance to feed a growing world population, and to develop interventions for reducing the rate and impact of environmental changes, natural disasters and climate change? How can quantitative modeling lead to high-performance molecules, materials, and help prevent wildfires and predict earthquakes? UCR researchers working on these problems are from a wide range of research specializations, including environmental science, agriculture, biology, chemistry, physics, engineering, computer science, statistics and applied mathematics. Since their research relies heavily on high-throughput and computational modeling approaches, the BD-HPC cluster will permit new computational approaches for solving these research problems.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
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DOI:
10.1038/s41467-022-35080-0
发表时间:
2022-12-02
期刊:
NATURE COMMUNICATIONS
影响因子:
16.6
作者:
[Hwang, Youra, Han, Soeun, Yoo, Chan Yul, Hong, Liu, You, Chenjiang, Le, Brandon H., Shi, Hui, Zhong, Shangwei, Hoecker, Ute, Chen, Xuemei, Chen, Meng]
通讯作者:
Chen, Meng
Characterizing Protoclusters and Protogroups at z ∼ 2.5 Using Lyα Tomography
使用 Lyα 断层扫描表征 z ≤ 2.5 处的原簇和原群
DOI:
10.3847/1538-4357/ac6259
发表时间:
2022
期刊:
The Astrophysical Journal
影响因子:
--
作者:
[Qezlou, Mahdi, Newman, Andrew B., Rudie, Gwen C., Bird, Simeon]
通讯作者:
Bird, Simeon
DOI:
10.1371/journal.pbio.3001890
发表时间:
2022-11
期刊:
PLoS biology
影响因子:
9.8
作者:
[]
通讯作者:
DOI:
10.1088/1478-3975/abf7d8
发表时间:
2021
期刊:
Physical Biology
影响因子:
2
作者:
[Wang, Qixuan, Wu, Hao]
通讯作者:
Wu, Hao
DOI:
10.1039/d2sm00514j
发表时间:
2022
期刊:
Soft Matter
影响因子:
3.4
作者:
[Rallabandi, Bhargav, Wang, Qixuan, Potomkin, Mykhailo]
通讯作者:
Potomkin, Mykhailo
ABI Development: systemPipeR - automated NGS workflow and report generation environment
-
批准号:1661152
-
项目类别:Standard Grant
-
资助金额:$64.89万
-
财政年份:2017
-
负责人:Thomas Girke
-
依托单位:
MRI: Acquisition of a Big Data Compute Cluster for Interdisciplinary Research
-
批准号:1429826
-
项目类别:Standard Grant
-
资助金额:$54.85万
-
财政年份:2014
-
负责人:Thomas Girke
-
依托单位:
ChemMine Tools: an Open Source Framework for Chemical Genomics
-
批准号:0957099
-
项目类别:Continuing Grant
-
资助金额:$60.1万
-
财政年份:2010
-
负责人:Thomas Girke
-
依托单位:
海外基金