Development of a system for enhancing protein thermostability in vivo using hyperthermophiles
Development of a system for enhancing protein thermostability in vivo using hyperthermophiles
批准号:
15350100
负责人:
ATOMI Haruyuki
金额:
$9.73万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2003
资助国家:
日本
项目状态:
已结题
起止时间:
2003 至 2004
中文摘要
我们一直在研究来自其他古细菌菌株的同源基因是否可以补充T.kodakaraensis的内源性基因破坏,以及热稳定性较差的蛋白质是否可以在增加热稳定性方面受到定向进化的影响。takakaraensis KUW1是一株pyrF和trpE基因缺失的菌株。通过同源重组,从嗜热古细菌furiosus(最适生长温度为100℃)和嗜热古细菌Thermoplasma volcanium(最适生长温度为60℃)中分别引入了pyrF基因。结果发现,重组菌株携带的卟啉卟啉pyrF基因表现出尿嘧啶原生化,表明基因互补已经发生。火山T的基因也获得了类似的结果,但是,只有在75℃或以下的温度下才能观察到持续的生长。有趣的是,在75℃时,我们在该菌株中发现了CpkB的细胞内积累,而在野生型T.kodakaraensis KOD1和携带P.furiosus pyrF的菌株中则没有。由于75℃的温度远低于红枣的最佳生长温度,因此CpkB的积累不可能是热胁迫的结果。这就提出了CpkB表达可能是对T火山中部分变性的PyrF蛋白的细胞内存在作出反应,这一机制与在细菌和真核生物中观察到的未折叠蛋白反应相对应。
英文摘要
We have been examining whether homologous genes from other archaeal strains could complement endogenous gene disruption in T.kodakaraensis and whether proteins with less thermostability could be subject to directed evolution in terms of increasing thermostability. T.kodakaraensis KUW1 is a strain whose pyrF and trpE genes are deleted. To this strain, we introduced pyrF genes from the hyperthermophilic archaeon Pyrococcus furiosus (optimum growth temperature 100℃) or the thermophilic archaeon Thermoplasma volcanium (optimum 60℃) via homologous recombination. We found that the recombinant strain with the P. furiosus pyrF gene exhibited uracil prototrophy, indicating that gene complementation had occurred. Similar results were obtained with the gene from T volcanium, however, consistent growth was observed only at temperatures at or below 75℃. Intriguingly, at 75℃, we found an intracellular accumulation of CpkB in this strain, but not in the wild type T.kodakaraensis KOD1 or in the strain harboring P.furiosus pyrF. As the 75℃ temperature is well below the optimal growth temperature of T.kodakaraensis, the accumulation of CpkB cannot be due to thermal stress. This raise the possibilities that CpkB expression is responding to the intracellular presence of partially denatured PyrF protein from T volcanium, a mechanism which corresponds to the unfolded protein response observed in bacteria and eukaryotes.
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Description of Thermococcus kodakaraensis sp. now., a well studied hyperthermophilic archaeon previously reported as Pyrococcus sp. KOD1
Thermococcus kodakaraensis sp. 的描述。
DOI:
--
发表时间:
2004
期刊:
Archaea 1
影响因子:
--
作者:
[H.Atomi, T.Fukui, T.Kanai, M.Morikawa, T.Imanaka]
通讯作者:
T.Imanaka
T.Sato, Toshiaki Fukui, H.Atomi, T.Imanaka: "Targeted gene disruption by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1"J.Bacteriol.. 185・1. 210-220 (2003)
T.Sato、Toshiaki Fukui、H.Atomi、T.Imanaka:“通过同源重组对超嗜热古菌 Thermococcus kodakaraensis KOD1 进行靶向基因破坏”J.Bacteriol.. 185・1(2003)。
DOI:
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发表时间:
期刊:
影响因子:
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作者:
[]
通讯作者:
An improved and versatile transformation system allowing multiplegenetic manipulations of the hyperthermophilic archaeon Thermococcus kodakaraensis
一种改进的多功能转化系统,允许对超嗜热古菌Thermococcus kodakaraensis进行多重遗传操作
DOI:
--
发表时间:
期刊:
Appl.Environ.Microbiol. (発表予定)
影响因子:
--
作者:
[T.Sato, T.Fukui, H.Atomi, T.Imanaka]
通讯作者:
T.Imanaka
DOI:
10.1128/jb.186.14.4829-4833.2004
发表时间:
2004-07-01
期刊:
JOURNAL OF BACTERIOLOGY
影响因子:
3.2
作者:
[Atomi, H, Matsumi, R, Imanaka, T]
通讯作者:
Imanaka, T
T.Tanaka, T.Fukui, H.Atomi, T.Imanaka: "Characterization of an exo-β-D-glucosaminidase involved in a novel chitinolytic pathway in Archaea"J.Bacteriol.. 185・17. 5175-5181 (2003)
T.Tanaka、T.Fukui、H.Atomi、T.Imanaka:“古细菌中新型几丁质分解途径中涉及的外切-β-D-氨基葡萄糖苷酶的表征”J.Bacteriol.. 185・17(2003) )
DOI:
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发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
共 14 条
Exploring the possibilities of genome recombination
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批准号:22655053
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项目类别:Grant-in-Aid for Challenging Exploratory Research
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资助金额:$2.19万
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财政年份:2010
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负责人:ATOMI Haruyuki
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依托单位:
Determining the regulons and their functions in hyperthermophiles
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批准号:21350092
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$12.23万
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财政年份:2009
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负责人:ATOMI Haruyuki
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依托单位:
Novel metabolic pathway discovery based on contradictions between genome data and biochemical properties
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批准号:19310126
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$13.23万
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财政年份:2007
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负责人:ATOMI Haruyuki
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依托单位:
Elucidation of gene regulation systems based on genome analysis
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批准号:17350083
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$9.66万
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财政年份:2005
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负责人:ATOMI Haruyuki
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依托单位:
Studies on non-covalent interactions between strongly conelated biomolecules
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批准号:13031047
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$18.05万
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财政年份:2001
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负责人:ATOMI Haruyuki
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依托单位:
Anaerobic carbon dioxide fixation by microorganisms
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批准号:11450314
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项目类别:Grant-in-Aid for Scientific Research (B).
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资助金额:$8.26万
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财政年份:1999
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负责人:ATOMI Haruyuki
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依托单位:
海外基金