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Studies of heme degradation mechanism by heme oxygenase based on the crystal structures.

Studies of heme degradation mechanism by heme oxygenase based on the crystal structures.
基于晶体结构的血红素加氧酶降解血红素机制的研究。
批准号:
15590260
负责人:
NOGUCHI Masato
金额:
$1.86万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2003
资助国家:
日本
项目状态:
已结题
起止时间:
2003 至 2005

项目摘要

项目成果

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中文摘要
翻译
血红素加氧酶-1(HO-1)利用NADPH-细胞色素P450还原酶(CPR)提供的电子,以分子氧为代价催化血红素的生理降解。我们在这个项目中得到了结果(1)-(3)。(1)利用表面等离子体共振技术研究了NADP(H)对HO-1与CPR相互作用的影响,并对HO-1/CPR复合体进行了计算机模拟分析。Arg-185的胍基位于NADPH的2‘-磷酸的氢键距离内,表明Arg-185通过与磷酸基团的静电相互作用参与了与CPR的结合。另一方面,Lys-149靠近CPR的FMN结合部位附近的一簇酸性氨基酸。因此,Lys-149和Lys-153似乎以这样一种方式与CPR相互作用,即定位氧化还原伙伴,以实现从CPR的FMN到HO-1的血红素的最佳电子转移。(2)为了研究心肺复苏过程中的电子传递途径,我们用大鼠fmn-de…检测了HO-1(RHO-1)对血红素的降解。更多的心肺复苏术。通过对CPR突变体Y140A/Y178A对2M KbR的透析,制备了去FMN的CPR。将铁的血红素铁还原到亚铁状态的第一个电子必须由CPR的FMN提供。马鞭铁转化为胆绿素铁络合物的电子可以由FAD或NADPH通过血红素丙酸盐提供,而还原胆绿素铁的最终电子应由CPR的FMN提供,从而导致亚铁和胆绿素的释放。(3)用快速扫描停流法研究了铁和亚铁形式的α-羟基血红素与水溶性大鼠血红素加氧酶-1的络合反应。在pH值为7.4和9.0时,α-羟基亚铁血红素与O_2反应生成氧相关速率常数为4×10~(-5)M^~(-1)>S^~(-1)。在pH值为6.5时,反应速率常数降至2.8×10~(-5)M^~(-1)~(-1);S~(-1)~(-1)~(-1),表明O_2直接攻击α-羟基生成的p-中性自由基形式α-羟基。亚铁α-羟基血红素与O2反应生成亚铁马鞭铁,生成一种新的中间体,其最大吸收峰位于415和815 nm。两步反应的速率常数分别为68和145 S^~(-1)。这些结果表明,在生理条件下,α-羟基血红素向马鞭铁的转化比配位铁(<1 S)的还原要快得多,这表明在体内,α-羟基血红素铁向马鞭铁的转化先于α-羟基血红素铁的还原。较少
英文摘要
Heme oxygenase-1(HO-1)catalyzes the physiological degradation of heme at the expense of molecular oxygen using electrons donated by NADPH-cytochrome P450 reductase(CPR). We obtained the results(1)-(3)in this project. (1)we investigated the effect of NADP(H)on the interaction of HO-1 with CPR by surface plasmon resonance and analyzed by computer modeling of the HO-1/CPR complex. The guanidino group of Arg-185 is located within the hydrogen bonding distance of 2'-phosphate of NADPH, suggesting that Arg-185 contributes to the binding to CPR through an electrostatic interaction with the phosphate group. On the other hand, Lys-149 is close to a cluster of acidic amino acids near the FMN binding site of CPR. Thus, Lys-149 and Lys-153 appear to interact with CPR in such a way as to orient the redox partners for optimal electron transfer from FMN of CPR to heme of HO-1. (2)To investigate the electron transfer pathway from CPR, we examined the heme degradation by rat HO-1(rHO-1)using rat FMN-de … More pleted CPR. The FMN-depleted CPR was prepared by dialyzing the CPR mutant, Y140A/Y178A, against 2 M KBr. The first electron to reduce the ferric heme iron to the ferrous state must be supplied from FMN of CPR. The electrons for conversion of verdoheme to ferric biliverdin-iron chelate can be supplied from FAD or NADPH via heme propionates, and that the final electron to reduce ferric biliverdin, leading to the release of ferrous iron and biliverdin, should be provided from FMN of CPR. (3)O_2-dependent reactions of the ferric and ferrous forms of α-hydroxyheme complexed with water-soluble rat heme oxygenase-1 were examined by rapid-scan stopped-flow measurements. Ferric α-hydroxyheme reacted with O_2 to form ferric verdoheme with an O_2-dependent rate constant of 4x10^5 M^<-1>s^<-1> at pH 7.4 and 9.0. A decrease of the rate constant to 2.8x10^5 M^<-1>s^<-1> at pH 6.5 indicates that the reaction proceeds by direct attack of O_2 on the p-neutral radical form of α-hydroxyheme, which is generated by deprotonation of the α-hydroxy group. The reaction of ferrous α-hydroxyheme with O_2 yielded ferrous verdoheme in a biphasic fashion involving a new intermediate having absorption maxima at 415 and 815 nm. The rate constants for this two-step reaction were 68 and 145 s^<-1>. These results show that conversion of α-hydroxyheme to verdoheme is much faster than the reduction of coordinated iron(<1 s^<-1>)under physiological conditions suggesting that, in vivo, the conversion of ferric α-hydroxyheme to ferric verdoheme precedes the reduction of ferric α-hydroxyheme. Less
期刊论文(78)
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会议论文
Crystal structure of rat heme oxygenase-1 in complex with biloverdin-iron chelate.
大鼠血红素加氧酶-1 与比洛维丁-铁螯合物复合物的晶体结构。
DOI: --
发表时间: 2003
期刊: J.Biol.Chem 278・34
影响因子: --
作者: [Fukami, F., Murakami, Y.et al., Masakazu Sugishima]
通讯作者: Masakazu Sugishima
A kinetic study of the mechanism of conversion of α-hydroxyheme to verdoheme while bound to heme oxygenase
α-羟基血红素与血红素加氧酶结合转化为绿血红素机制的动力学研究
DOI: --
发表时间: 2005
期刊: Biochemical and Biophysical Research Communications 338・1
影响因子: --
作者: [Shinnichiro Suzuki, Yong Xie, Hiroshi Yokoyama, Kazuya Yamaguchi, Yong Xie, Kunishige Kataoka, Yong Xie, Kunishige Kataoka, Kazuya Yamaguchi, Kunishige Kataoka, Yong Xie, Shinnichiro Suzuki, Kazuya Yamaguchi, Masahito Sano, 佐野正人, Tsuyoshi Inoue, Yuichiro Higashimoto, Kazuya Yamaguchi, Shinnichiro Suzuki, 坂本 寛, Kazuya Yamaguchi, Hiroshi Sakamoto]
通讯作者: Hiroshi Sakamoto
DOI: --
发表时间: 2004
期刊:
影响因子: --
作者: [Yonezawa, K., Hayashi T., Machide M. et al., 吉田一郎ら, 東 秀明, Rie Nakata, 吉田一郎ら]
通讯作者: 吉田一郎ら
野口 正人: "医学のための基礎分子生物学"南山堂. 120 (2003)
野口正人:“医学基础分子生物学”Nanzando 120(2003)。
DOI: --
发表时间:
期刊:
影响因子: --
作者: []
通讯作者:
39
    Electron transfer sytem to heme oxygenase from cytochrome P450
    Investigation of the intermediary steps and electron transfer mechanism of heme degradation by heme oxygenase
    • 批准号:
      21590321
    • 项目类别:
      Grant-in-Aid for Scientific Research (C)
    • 资助金额:
      $2.41万
    • 财政年份:
      2009
    • 负责人:
      NOGUCHI Masato
    • 依托单位:
    Preparative synthesis of polysaccharide by using direct activation method
    • 批准号:
      21750109
    • 项目类别:
      Grant-in-Aid for Young Scientists (B)
    • 资助金额:
      $2.83万
    • 财政年份:
      2009
    • 负责人:
      NOGUCHI Masato
    • 依托单位:
    One step synthesis of polysaccharide from free saccharide using direct activation method
    • 批准号:
      19750087
    • 项目类别:
      Grant-in-Aid for Young Scientists (B)
    • 资助金额:
      $2.36万
    • 财政年份:
      2007
    • 负责人:
      NOGUCHI Masato
    • 依托单位:
    海外基金