Studies of heme degradation mechanism by heme oxygenase based on the crystal structures.

基于晶体结构的血红素加氧酶降解血红素机制的研究。

基本信息

  • 批准号:
    15590260
  • 负责人:
  • 金额:
    $ 1.86万
  • 依托单位:
  • 依托单位国家:
    日本
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
  • 财政年份:
    2003
  • 资助国家:
    日本
  • 起止时间:
    2003 至 2005
  • 项目状态:
    已结题

项目摘要

Heme oxygenase-1(HO-1)catalyzes the physiological degradation of heme at the expense of molecular oxygen using electrons donated by NADPH-cytochrome P450 reductase(CPR). We obtained the results(1)-(3)in this project. (1)we investigated the effect of NADP(H)on the interaction of HO-1 with CPR by surface plasmon resonance and analyzed by computer modeling of the HO-1/CPR complex. The guanidino group of Arg-185 is located within the hydrogen bonding distance of 2'-phosphate of NADPH, suggesting that Arg-185 contributes to the binding to CPR through an electrostatic interaction with the phosphate group. On the other hand, Lys-149 is close to a cluster of acidic amino acids near the FMN binding site of CPR. Thus, Lys-149 and Lys-153 appear to interact with CPR in such a way as to orient the redox partners for optimal electron transfer from FMN of CPR to heme of HO-1. (2)To investigate the electron transfer pathway from CPR, we examined the heme degradation by rat HO-1(rHO-1)using rat FMN-de … More pleted CPR. The FMN-depleted CPR was prepared by dialyzing the CPR mutant, Y140A/Y178A, against 2 M KBr. The first electron to reduce the ferric heme iron to the ferrous state must be supplied from FMN of CPR. The electrons for conversion of verdoheme to ferric biliverdin-iron chelate can be supplied from FAD or NADPH via heme propionates, and that the final electron to reduce ferric biliverdin, leading to the release of ferrous iron and biliverdin, should be provided from FMN of CPR. (3)O_2-dependent reactions of the ferric and ferrous forms of α-hydroxyheme complexed with water-soluble rat heme oxygenase-1 were examined by rapid-scan stopped-flow measurements. Ferric α-hydroxyheme reacted with O_2 to form ferric verdoheme with an O_2-dependent rate constant of 4x10^5 M^<-1>s^<-1> at pH 7.4 and 9.0. A decrease of the rate constant to 2.8x10^5 M^<-1>s^<-1> at pH 6.5 indicates that the reaction proceeds by direct attack of O_2 on the p-neutral radical form of α-hydroxyheme, which is generated by deprotonation of the α-hydroxy group. The reaction of ferrous α-hydroxyheme with O_2 yielded ferrous verdoheme in a biphasic fashion involving a new intermediate having absorption maxima at 415 and 815 nm. The rate constants for this two-step reaction were 68 and 145 s^<-1>. These results show that conversion of α-hydroxyheme to verdoheme is much faster than the reduction of coordinated iron(<1 s^<-1>)under physiological conditions suggesting that, in vivo, the conversion of ferric α-hydroxyheme to ferric verdoheme precedes the reduction of ferric α-hydroxyheme. Less
血红素加氧酶-1(HO-1)利用NADPH-细胞色素P450还原酶(CPR)提供的电子,以牺牲分子氧为代价催化血红素的生理降解。我们在本项目中得到了(1)-(3)的结果。(1)we通过表面等离子体共振研究了NADP(H)对HO-1与CPR相互作用的影响,并通过HO-1/CPR复合物的计算机模拟进行了分析。Arg-185的胍基位于NADPH的2 '-磷酸的氢键距离内,表明Arg-185通过与磷酸基团的静电相互作用有助于与CPR结合。另一方面,Lys-149靠近CPR的FMN结合位点附近的酸性氨基酸簇。因此,Lys-149和Lys-153似乎以这样的方式与CPR相互作用,从而定向氧化还原伴侣,以实现从CPR的FMN到HO-1的血红素的最佳电子转移。(2)To为了研究CPR的电子传递途径,我们用大鼠FMN-de检测了大鼠HO-1(rHO-1)对血红素的降解, ...更多信息 做了心肺复苏通过用2 M KBr透析CPR突变体Y140 A/Y178 A来制备耗尽了FMN的CPR。还原亚铁血红素铁到亚铁态的第一个电子必须由CPR的FMN提供。用于将绿血红素转化为铁胆绿素-铁螯合物的电子可以由FAD或NADPH通过血红素丙酸盐提供,并且还原铁胆绿素的最终电子,导致亚铁和胆绿素的释放,应该由CPR的FMN提供。(3)O用快速扫描停流法研究了α-羟基血红素的铁和亚铁形式与水溶性大鼠血红素加氧酶-1络合的反应。在pH 7.4和9.0时,α-羟基血红素铁与O_2反应生成绿血红素铁,其依赖于O_2的速率常数为4 × 10^5 M^<-1>s^<-1>。在pH6.5时,反应速率常数下降到2.8 × 10 ~(^5)M ~<-1>(^8<-1>),表明反应是通过O_2直接攻击α-羟基血红素的p-中性自由基形式进行的,而α-羟基血红素是由α-羟基去质子化产生的。亚铁α-羟基血红素与O_2反应生成亚铁绿血红素,并在415和815 nm处有一个新的吸收峰。该两步反应的速率常数为68和145 s-1<-1>。这些结果表明,在生理条件下,α-羟基血红素向绿血红素的转化比配位铁的还原快得多(&lt;1 s +1<-1>),表明在体内,铁α-羟基血红素向铁绿血红素的转化先于铁α-羟基血红素的还原。少

项目成果

期刊论文数量(78)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Crystal structure of rat heme oxygenase-1 in complex with biloverdin-iron chelate.
大鼠血红素加氧酶-1 与比洛维丁-铁螯合物复合物的晶体结构。
  • DOI:
  • 发表时间:
    2003
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Fukami;F.;Murakami;Y.et al.;Masakazu Sugishima
  • 通讯作者:
    Masakazu Sugishima
A kinetic study of the mechanism of conversion of α-hydroxyheme to verdoheme while bound to heme oxygenase
α-羟基血红素与血红素加氧酶结合转化为绿血红素机制的动力学研究
  • DOI:
  • 发表时间:
    2005
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Shinnichiro Suzuki;Yong Xie;Hiroshi Yokoyama;Kazuya Yamaguchi;Yong Xie;Kunishige Kataoka;Yong Xie;Kunishige Kataoka;Kazuya Yamaguchi;Kunishige Kataoka;Yong Xie;Shinnichiro Suzuki;Kazuya Yamaguchi;Masahito Sano;佐野正人;Tsuyoshi Inoue;Yuichiro Higashimoto;Kazuya Yamaguchi;Shinnichiro Suzuki;坂本 寛;Kazuya Yamaguchi;Hiroshi Sakamoto
  • 通讯作者:
    Hiroshi Sakamoto
実践PBLチュートリアルガイド
实用PBL教程指南
  • DOI:
  • 发表时间:
    2004
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Yonezawa;K.;Hayashi T.;Machide M. et al.;吉田一郎ら;東 秀明;Rie Nakata;吉田一郎ら
  • 通讯作者:
    吉田一郎ら
野口 正人: "医学のための基礎分子生物学"南山堂. 120 (2003)
野口正人:“医学基础分子生物学”Nanzando 120(2003)。
  • DOI:
  • 发表时间:
  • 期刊:
  • 影响因子:
    0
  • 作者:
  • 通讯作者:
Crystal Structure of Rat Heme Oxygenase-1 in Complex with Biliverdin-Iron Chelate
  • DOI:
    10.1074/jbc.m303682200
  • 发表时间:
    2003-08
  • 期刊:
  • 影响因子:
    4.8
  • 作者:
    M. Sugishima;H. Sakamoto;Y. Higashimoto;M. Noguchi;K. Fukuyama
  • 通讯作者:
    M. Sugishima;H. Sakamoto;Y. Higashimoto;M. Noguchi;K. Fukuyama
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NOGUCHI Masato其他文献

NOGUCHI Masato的其他文献

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{{ truncateString('NOGUCHI Masato', 18)}}的其他基金

Electron transfer sytem to heme oxygenase from cytochrome P450
从细胞色素 P450 到血红素加氧酶的电子转移系统
  • 批准号:
    24590366
  • 财政年份:
    2012
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
Investigation of the intermediary steps and electron transfer mechanism of heme degradation by heme oxygenase
血红素加氧酶降解血红素的中间步骤和电子传递机制的研究
  • 批准号:
    21590321
  • 财政年份:
    2009
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
Preparative synthesis of polysaccharide by using direct activation method
直接活化法制备多糖的合成
  • 批准号:
    21750109
  • 财政年份:
    2009
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for Young Scientists (B)
One step synthesis of polysaccharide from free saccharide using direct activation method
直接活化法从游离糖一步合成多糖
  • 批准号:
    19750087
  • 财政年份:
    2007
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for Young Scientists (B)
The intermediate steps of heme oxygenase reaction and the physiological significance of carbon monoxide as a gaseous transmitter
血红素加氧酶反应的中间步骤和一氧化碳作为气体递质的生理意义
  • 批准号:
    18590278
  • 财政年份:
    2006
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
The study of the heme degradation mechanism by heme oxygenase based on ESR and NMR spectroscopied and crystal structures
基于ESR和NMR波谱和晶体结构的血红素加氧酶降解血红素机制的研究
  • 批准号:
    12670125
  • 财政年份:
    2000
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
SHORT-TERM PREDICTION OF RAINFALL BY RADAR DATA AND CONSTRUCTION OF FLOOD WARNING SYSTEM IN URBAN AREA
雷达数据短期降雨预测及城市洪水预警系统建设
  • 批准号:
    07558059
  • 财政年份:
    1995
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
ESTIMATION OF POLLUTANT RUNOFF FROM AN URBAN AREA AND ITS INFLUENCE ON WATER ENVIRONMENT
城市地区污染物径流估算及其对水环境的影响
  • 批准号:
    06650569
  • 财政年份:
    1994
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (C)
The alpha-amidating enzyme. The intermediary reaction steps and the structure/function relationship as a bifunctional enzyme.
α-酰胺化酶。
  • 批准号:
    05680558
  • 财政年份:
    1993
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (C)
Purification of -amidating enzyme and elucidation of its reaction mechanism during the maturation process of amidated peptide hormones
酰胺化肽激素成熟过程中α-酰胺化酶的纯化及其反应机制的阐明
  • 批准号:
    62580143
  • 财政年份:
    1987
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (C)

相似海外基金

CAREER: Unraveling Diverse Mechanisms of Heme Degradation Processes
职业:揭示血红素降解过程的多种机制
  • 批准号:
    2144794
  • 财政年份:
    2022
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Continuing Grant
Emerging role of heme and heme degradation products in the modulation of cardiac ion channels
血红素和血红素降解产物在心脏离子通道调节中的新作用
  • 批准号:
    10090373
  • 财政年份:
    2021
  • 资助金额:
    $ 1.86万
  • 项目类别:
Emerging role of heme and heme degradation products in the modulation of cardiac ion channels
血红素和血红素降解产物在心脏离子通道调节中的新作用
  • 批准号:
    10493086
  • 财政年份:
    2021
  • 资助金额:
    $ 1.86万
  • 项目类别:
Emerging role of heme and heme degradation products in the modulation of cardiac ion channels
血红素和血红素降解产物在心脏离子通道调节中的新作用
  • 批准号:
    10668491
  • 财政年份:
    2021
  • 资助金额:
    $ 1.86万
  • 项目类别:
On the Mechanisms of IsdG-based Heme Degradation and Inhibition of Heme b Biosynthesis in S. Aureus
基于IsdG的金黄色葡萄球菌血红素降解及抑制血红素b生物合成的机制研究
  • 批准号:
    2003882
  • 财政年份:
    2020
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Standard Grant
Cellular and molecular mechanism underlying the modulation of neuronal excitability by heme and heme degradation products
血红素和血红素降解产物调节神经元兴奋性的细胞和分子机制
  • 批准号:
    392037398
  • 财政年份:
    2018
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Research Grants
A radical new paradigm for heme degradation in enteric pathogens
肠道病原体血红素降解的全新范例
  • 批准号:
    9906908
  • 财政年份:
    2017
  • 资助金额:
    $ 1.86万
  • 项目类别:
A radical new paradigm for heme degradation in enteric pathogens
肠道病原体血红素降解的全新范例
  • 批准号:
    9929890
  • 财政年份:
    2017
  • 资助金额:
    $ 1.86万
  • 项目类别:
A radical new paradigm for heme degradation in enteric pathogens
肠道病原体血红素降解的全新范例
  • 批准号:
    9366043
  • 财政年份:
    2017
  • 资助金额:
    $ 1.86万
  • 项目类别:
Impact of heme and heme degradation products on acute kidney injury associated with Shiga toxin 2-induced hemolytic-uremic syndrome
血红素和血红素降解产物对志贺毒素2诱导的溶血尿毒症综合征相关急性肾损伤的影响
  • 批准号:
    273371358
  • 财政年份:
    2015
  • 资助金额:
    $ 1.86万
  • 项目类别:
    Research Units
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