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Biological significance of unmethylated DNA in human testicular cancer.

人类睾丸癌中非甲基化 DNA 的生物学意义。

基本信息

批准号：
15591682
负责人：
NARITA Mitsuhiro
金额：
$ 2.24万
依托单位：
Department of Urology, Faculty of Medicine, Shiga University of Medical Science
依托单位国家：
日本
项目类别：
Grant-in-Aid for Scientific Research (C)
财政年份：
2003
资助国家：
日本
起止时间：
2003 至 2004
项目状态：
已结题

项目摘要

In this project we found testicular germ-cell tumors(TGCTs) carry unique epigenetic profiles : The DNAs of TGCTs are relatively unmethylated in comparison with those of other somatic tissue derived cancer. Furthermore, we developed a novel DNA tumor marker for testicular germ cell tumors(TGCTs) that is based on the unmethylated DNA profile of a neoplasm.We have shown that XIST expression in TGCTs is not associated with the methylation of X-linked genes and is therefore mechanistically distinct from the XIST expression in female inactive X chromosomes. Thus, supernumerical X chromosomes in TGCTs were predominantly hypomethylated and active regardless of XIST expression (J.Urol 2003 ).We have reported that aberrant methylation at the promoter of tumor related genes are common in testicular lymphomas, but not in TGCTs (GCC 2003).These data suggest that DNA of TGCTs may be ubiquitously regulated as unmethylated.Thus, it appears difficult to create a methylation-based DNA marker for TGCTs. Alternatively, we hypothesized that unmethylated DNA regions specific for TGCTs, if they exist, could be used as potential DNA markers. Among various genes, we have focused on the XIST gene, which is solely expressed in germ cells among male organs. Unmethylated XIST DNA fragments only exist in female PBLs, but not in male PBLs. We have detected unmethylated XIST DNA fragments in TGCT tissues and matching plasma samples from the patients with TGCTs (Lancet). We also clarified methylation profiles of TGCTs in several cancer testis antigen(CTA) genes (GCC 2005). Mechanisms for maintaining DNA free from methylation in TGCTs are under investigation in comparison with those in primordeal germ cells.

在这个项目中，我们发现睾丸生殖细胞肿瘤（tgct）携带独特的表观遗传谱：与其他体细胞组织源性癌症相比，tgct的dna相对未甲基化。此外，我们开发了一种基于肿瘤未甲基化DNA谱的睾丸生殖细胞肿瘤（tgct）的新型DNA肿瘤标志物。我们已经证明，tgct中的XIST表达与X连锁基因的甲基化无关，因此在机制上不同于女性失活X染色体中的XIST表达。因此，无论XIST的表达如何，tgct中的过量X染色体主要是低甲基化和活跃的（J.Urol 2003）。我们已经报道了肿瘤相关基因启动子的异常甲基化在睾丸淋巴瘤中很常见，但在tgct中并不常见（GCC 2003）。这些数据表明，tgct的DNA可能普遍被调控为未甲基化。因此，为tgct创建基于甲基化的DNA标记似乎很困难。或者，我们假设tgct特异性的未甲基化DNA区域，如果它们存在，可以用作潜在的DNA标记。在各种基因中，我们重点研究了XIST基因，它在男性器官中仅在生殖细胞中表达。未甲基化的XIST DNA片段仅存在于女性pbl中，而不存在于男性pbl中。我们在TGCT患者的TGCT组织和匹配的血浆样本中检测到未甲基化的XIST DNA片段（Lancet）。我们还澄清了几个癌睾丸抗原（CTA）基因中tgct的甲基化谱（GCC 2005）。与原始生殖细胞相比，tgct中维持DNA免于甲基化的机制正在研究中。