Molecular mechanism of translation arrest and mRNA degradation in cystathionine gamma-synthase, the key-step enzyme of methionine biosynthesis.
Molecular mechanism of translation arrest and mRNA degradation in cystathionine gamma-synthase, the key-step enzyme of methionine biosynthesis.
批准号:
16370016
负责人:
NAITO Satoshi
金额:
$9.86万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2004
资助国家:
日本
项目状态:
已结题
起止时间:
2004 至 2006
中文摘要
拟南芥胱硫醚γ-合酶(CGS)是催化甲硫氨酸生物合成的关键步骤。与生物合成途径中的许多关键步骤酶不同,CGS不是变构酶。CGS的表达在mRNA降解步骤中受到反馈调节,S-腺苷甲硫氨酸(SAM)充当效应器。mRNA降解后,形成5 '-截短的RNA物质作为降解中间体。位于CGS自身第一外显子编码区内的一段短的氨基酸,称为MTO 1区,在该调节中起顺式元件的作用。CGS调节发生在翻译过程中,并在小麦胚芽提取物的体外翻译系统中再现。使用体外系统的研究表明,在mRNA降解之前,SAM诱导在MTO 1区域周围的翻译延长停滞。因此,翻译延伸停滞引发mRNA降解。翻译停滞位点的精细定位显示,翻译停滞发生在位于MTO 1区域之后的Ser-94处,并且肽基-tRNA(Ser)积累。丙氨酸取代实验表明,除了MTO 1区氨基酸序列外,Trp-93和Ser-94对翻译停滞也很重要。新生肽通过核糖体出口通道从翻译核糖体中出现。该出口通道直径为15-20埃,长约100埃,新生肽的30-40个氨基酸残基将位于该通道中。MTO 1区域和阻滞位点(Ser-94)的相对位置表明,MTO 1区域新生肽位于出口通道内。对于CGS调控的遗传分析,分离了改变CGS表达的转录后调控的拟南芥突变体,并鉴定了它们的响应基因。
英文摘要
Cystathionine gamma-synthase (CGS) of Arabidopsis catalyzes the key step in methionine biosynthesis. Unlike many of the key-step enzymes in biosynthetic pathways, CGS is not an allosteric enzyme. Expression of CGS is feedback-regulated at the step of mRNA degradation and S-adenosylmethionine (SAM) acts as the effector. Upon mRNA degradation, 5'-truncated RNA species are formed as degradation intermediates. A short stretch of amino acids, termed the MTO1 region, located within the first exon-coding region of CGS itself, functions as the cis element in this regulation. CGS regulation occurs during translation and is reproduced in the in vitro translation system of wheat germ extract. Studies using the in vitro system revealed that, prior to the mRNA degradation, SAM induces translation elongation arrest at around the MTO1 region. Thus, translation elongation arrest triggers the mRNA degradation. Finer mapping of the translation arrest site showed that translation arrest occurs at Ser-94 located right after the MTO1 region, and peptidyl-tRNA(Ser) accumulates. Alanine substitution experiments identified that, in addition to the MTO1 region amino acid sequence, Trp-93 and Ser-94 are important for the translation arrest. A nascent peptide emerges from the translating ribosome through the ribosomal exit tunnel. This exit tunnel is 15-20 Angstroms in diameter and about 100 Angstroms long, and 30-40 amino acid residues of the nascent peptide will be located in the tunnel. Relative positions of the MTO1 region and the arrest site (Ser-94) suggest that the MTO1 region nascent peptide is located within the exit tunnel. For genetic analyses of the CGS regulation, Arabidopsis mutants that alter the post-transcriptional regulation of CGS expression were isolated and their responsive genes have been identified.
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Nascent peptide-mediated translation elongation arrest coupled with mRNA degradation in the CGS1 gene of Arabidopsis.
拟南芥 CGS1 基因中新生肽介导的翻译延伸停滞与 mRNA 降解相结合。
DOI:
--
发表时间:
2005
期刊:
Genes Dev. 19
影响因子:
--
作者:
[Tetsuhiro Ogawa, Sakura Inoue, Shunsuke Yajima, Makoto Hidaka, Haruhiko Masaki, K.Takahashi, S.Ohashi-Kumihiro, T. Takayama, H. Onouchi, T. Takayama, H. Onouchi]
通讯作者:
H. Onouchi
DOI:
10.1042/bst0320597
发表时间:
2004-08-01
期刊:
BIOCHEMICAL SOCIETY TRANSACTIONS
影响因子:
3.9
作者:
[Onouchi, H, Lambein, I, Naito, S]
通讯作者:
Naito, S
DOI:
10.1111/j.1365-313x.2006.02900.x
发表时间:
2006-11-01
期刊:
PLANT JOURNAL
影响因子:
7.2
作者:
[Higashi, Yasuhiro, Hirai, Masami Yokota, Saito, Kazuki]
通讯作者:
Saito, Kazuki
Nascent peptide-mediated translation elongation arrest coupled with mRNA degradation in the CGS gene of Arabidopsis.
拟南芥 CGS 基因中新生肽介导的翻译延伸停滞与 mRNA 降解相结合。
DOI:
--
发表时间:
2005
期刊:
Genes Dev. 19
影响因子:
--
作者:
[Onouchi H, Nagami Y, Haraguchi Y, Nakamoto M, Nishimura Y, Sakurai R, Nagao N, Kawasaki D, Kadokura Y, Naito S]
通讯作者:
Naito S
Starting up the functional ribosome-omics (ribosomomics): an approach from the translation arrest
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批准号:16K14746
-
项目类别:Grant-in-Aid for Challenging Exploratory Research
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资助金额:$2.41万
-
财政年份:2016
-
负责人:NAITO Satoshi
-
依托单位:
Realization of the crystal bases of level-zero representations of quantum affine algebras as algebraic cycles
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批准号:20540006
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.41万
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财政年份:2009
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负责人:NAITO Satoshi
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依托单位:
Molecular Mechanism of Nascent Peptide-Mediated Translation Arrest Involved in Feedback Regulation of Methionine Biosynthesis
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批准号:20370016
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$11.9万
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财政年份:2008
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负责人:NAITO Satoshi
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依托单位:
Regulation of RNA degradation by RNase
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批准号:17026001
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$14.72万
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财政年份:2005
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依托单位:
Study on the fusion products and crystalbases of level-zero representations of quantum affine algebras
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批准号:17540008
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.35万
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财政年份:2005
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负责人:NAITO Satoshi
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依托单位:
Study on the path models for extremal weight modules over a quantum affine algebra
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批准号:14540006
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.56万
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财政年份:2002
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负责人:NAITO Satoshi
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依托单位:
Molecular genetic studies of control of mRNA stability in the gene for the key enzyme of methionine biosynthesis
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批准号:13440233
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.69万
-
财政年份:2001
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负责人:NAITO Satoshi
-
依托单位:
Mechanism of response of seed storage protein gene expression to nutritional signals
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批准号:12138201
-
项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$58.18万
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财政年份:2000
-
负责人:NAITO Satoshi
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依托单位:
Molecular mechanism of regulation of methionine biosynthesis by mRNA stability : Studies using mto1 mutants of Arabidopsis.
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批准号:11440230
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项目类别:Grant-in-Aid for Scientific Research (B).
-
资助金额:$10.69万
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财政年份:1999
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负责人:NAITO Satoshi
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依托单位:
Molecular Biological Studies on the Regulation of MeEthionine Biosynthesis Using an Arabidopsis thaliana Mutant.
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批准号:09440262
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$6.72万
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财政年份:1997
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负责人:NAITO Satoshi
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依托单位:
Molecular Genetic Analyzes of an Arabidopsis thaliana Mutant that Over-accumulates Soluble methionine.
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批准号:07454214
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$4.48万
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财政年份:1995
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负责人:NAITO Satoshi
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依托单位:
Genetic analyzes of seed storage protein gene expression in response to environmental stimuli
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批准号:05640722
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项目类别:Grant-in-Aid for General Scientific Research (C)
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资助金额:$1.34万
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财政年份:1993
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负责人:NAITO Satoshi
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依托单位:
海外基金