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Molecular cytogenetic studies on the process of genomic and chromosomal reorganization in amphibians and reptiles

Molecular cytogenetic studies on the process of genomic and chromosomal reorganization in amphibians and reptiles
两栖类和爬行类基因组和染色体重组过程的分子细胞遗传学研究
批准号:
22370081
负责人:
MATSUDA Yoichi
金额:
$11.81万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2010
资助国家:
日本
项目状态:
已结题
起止时间:
2010-04-01 至 2013-03-31

项目摘要

项目成果

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中文摘要
翻译
为了描述四足动物的基因组和核型进化过程,我们构建了中华盘螺、暹罗鳄、四条锦蛇、拯救巨蜥、热带爪蟾和非洲爪蟾的比较细胞遗传学图谱。我们的研究结果提供了一种可能性,即四足动物的祖先核型至少有10个大型连锁群的大染色体和许多微染色体对,这已在鸡中保守。我们鉴定了光肩星天牛的所有9个同源染色体组,除两个倒位外,它们在同一组内都是同源的,并且在光肩星天牛之间的遗传连锁是高度保守的。tropicalis和X.除了一个融合和一个倒置。在大肠在quadrivirgata中,微染色体基因显示出比鸡中的大染色体基因显著更高的GC含量,这表明染色体大小依赖的GC异质性已经在2.75亿年前的鳞龙-祖龙分裂之前发生。
英文摘要
To delineate the process of genomic and karyotypic evolution of tetrapods, we constructed comparative cytogenetic maps of Pelodiscus sinensis, Crocodylus siamensis, Elaphe quadrivirgata, Varanus salvator, Xenopus tropicalis, and Xenopus laevis. Our results provide the possibility that the ancestral karyotype of tetrapods had at least 10 large linkage groups of macrochromosomes and many microchromosomal pairs, which have been conserved in the chicken. We identified all nine homoeologous chromosome groups of X laevis, which were homologous within the same groups except for two inversions, and the genetic linkages were highly conserved between X. tropicalis and X. laevis except for one fusion and one inversion. In E. quadrivirgata, microchromosomal genes showed significantly higher GC content than macrochromosomal genes as in the chicken, suggesting that the chromosome size-dependent GC heterogeneity had already occurred before the lepidosaur-archosaur split, 275 million years ago.
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会议论文
核型進化が語るもの-マイクロ染色体とゲノム構造の区画化-
核型进化告诉我们什么 - 微染色体和基因组结构的划分 -
DOI: --
发表时间: 2011
期刊:
影响因子: --
作者: [Fujishima, Masahiro, 松田洋一]
通讯作者: 松田洋一
Comparative genomics : tracking chromosomal evolution in vertebrates
比较基因组学:追踪脊椎动物的染色体进化
DOI: --
发表时间: 2011
期刊:
影响因子: --
作者: [表迫竜也, 西野敦雄, 西田宏記, Tanaka Kenya, Matsuda Y]
通讯作者: Matsuda Y
DOI: 10.1538/expanim.62.219
发表时间: 2013
期刊: Experimental animals
影响因子: 2.4
作者: [Ishishita S, Inui T, Matsuda Y, Serikawa T, Kitada K]
通讯作者: Kitada K
Dynamics of karyotypic evolution in squamate reptiles inferred comparative gene mapping
有鳞爬行动物核型进化动态推断比较基因图谱
DOI: --
发表时间: 2013
期刊:
影响因子: --
作者: [Srikulnath K, Matsubara K, Uno Y, Nishida C, Matsuda Y]
通讯作者: Matsuda Y
共 26 条
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    • 批准号:
      23530472
    • 项目类别:
      Grant-in-Aid for Scientific Research (C)
    • 资助金额:
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    • 财政年份:
      2011
    • 负责人:
      MATSUDA Yoichi
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    • 批准号:
      21791657
    • 项目类别:
      Grant-in-Aid for Young Scientists (B)
    • 资助金额:
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    • 财政年份:
      2009
    • 负责人:
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    • 批准号:
      17530285
    • 项目类别:
      Grant-in-Aid for Scientific Research (C)
    • 资助金额:
      $1.56万
    • 财政年份:
      2005
    • 负责人:
      MATSUDA Yoichi
    • 依托单位:
    Molecular cytogenetic studies on the evolution of genome structure in reptiles and birds.
    • 批准号:
      15370001
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
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    • 财政年份:
      2003
    • 负责人:
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