Microbiology Whole Genome Sequencing

分析轨道4：全基因组测序 摘要/摘要 马萨诸塞州公共卫生实验室(MASPHL)正在为 微生物分析轨道4，全基因组测序，摘自PAR-20-105，实验室 灵活筹资模式(U19)。MASPHL是PulseNet的成员已有20多年 几年来，以及过去三年来GenomeTrakr的一个无资金支持的成员。到目前为止，MASPHL 已向PulseNet数据库提交了4164个分离序列，并向PulseNet数据库提交了12个序列 GenomeTrakr.在发送到PulseNet的邮件中，有20封来自食物或环境来源。 尽管从食品样本中分离出的病原体数量很少，但任何 已按照适当程序进行了排序，并提交给 国家数据库。通过参与这一分析轨道，MASPHL将拥有资源 有必要重点提交从人和动物性食品中分离出来的所有细菌病原体 产品。正如在前面的轨道中所写的那样，MASPHL已经开始重新定义它与 食品保护计划(FPP)中的人工食品监管计划(MFRP)官员 并已开始与动物性食品监管计划(AFRP)发展关系 马萨诸塞州农业资源部(MDAR)官员。在建造这些建筑时 关系，MASPHL已经能够提高人类食品的质量 抽样，并集中收集风险较高的食物，这些食物更可能被掺假。和 通过将MFRP采样增加到250个样本，并添加100个AFRP样本，MASPHL 与前几年相比，能够很好地识别和测序更多的病原体，以及 因此，加强整个国家综合食品安全体系建设。

Analytical Track 4: Whole Genome Sequencing Abstract/Summary The Massachusetts State Public Health Laboratory (MASPHL) is requesting funding for Microbiology Analytical Track 4, Whole Genome Sequencing, from PAR-20-105, Laboratory Flexible Funding Model (U19). MASPHL has been a member of PulseNet for more than 20 years, and an unfunded member of GenomeTrakr for the past three years. To date, MASPHL has submitted 4,164 isolate sequences to the PulseNet database, and 12 sequences to GenomeTrakr. Among those sent to PulseNet, 20 were from food or environmental sources. Although the numbers of pathogens isolated from food samples has been low, any that are isolated have been sequenced in accordance with appropriate procedures and submitted to the national databases. By participating in this analytical track, MASPHL will have the resources necessary to focus on submitting all bacterial pathogens isolated from human and animal food products. As written in previous tracks, MASPHL has begun to redefine its relationship with the Manufactured Food Regulatory Program (MFRP) officials in the food protection program (FPP) and has begun to develop a relationship with the Animal Food Regulatory Program (AFRP) officials in the Massachusetts Department of Agricultural Resources (MDAR). In building these relationships, MASPHL has been able to enhance the quality of the human food products sampled and to focus on collecting higher risk foods that are more likely to be adulterated. And by increasing the MFRP sampling to 250 samples, and adding 100 AFRP samples, MASPHL is well positioned to identify and sequence many more pathogens than in previous years, and therefore enhance the whole national integrated food safety system.