Biophysics of Protein Disorder and Complexity, Single Molecules to Mesoscales
Biophysics of Protein Disorder and Complexity, Single Molecules to Mesoscales
批准号:
10542733
负责人:
Ashok A Deniz
金额:
$48.38万
依托单位国家:
美国
项目类别:
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-01-01 至 2023-12-31
关键词:
AddressAgingAreaBindingBiochemistryBiologyBiophysical ProcessBiophysicsCell physiologyCellsCellular biologyComplexDiseaseFutureGoalsIn VitroLinkMalignant NeoplasmsMembraneOrganellesParkinson DiseasePeptidesPhaseProteinsProteomeSystemWorkalpha synucleinbiological systemsexperimental studyimprovedintermolecular interactionsingle moleculetool
中文摘要
胞内无序蛋白(IDP)是真核生物蛋白质组的重要组成部分,
并且对细胞功能和几种疾病至关重要。他们还参与了
无膜细胞器(MLO)的形成和动力学,对细胞的生长至关重要。
生物化学关于详细的信息,仍有几个重要的未决问题有待回答。
国内流离失所者和MLO的生物物理学。解决这些问题是拟议的
工作在我们过去和目前在这一领域所作努力的基础上,我们将在几个领域开展工作,
方向使用与ALS和癌症相关的肽和蛋白质系统,我们将使用
单分子和系综实验来探测这些系统的重要方面,
包括理解分子内和分子间相互作用的相互作用,
相图中的重入转变和不对称性,以及液滴系统中的老化。我们
还将进行理解膜诱导的结合折叠的实验,
帕金森病相关蛋白α-突触核蛋白的聚集。单分子工具将
在项目过程中,也可以根据需要进行改进或进一步开发。这些方向也将
在工作的后期阶段或在细胞中进行更复杂的体外和细胞实验
未来的实验总的来说,拟议的工作预计将改善
了解细胞生物学和疾病相关性的生物物理机制
这些重要的生物系统。
英文摘要
Intrinsically disordered proteins (IDPs) comprise a significant fraction of eukaryotic proteomes,
and are critical for cellular function and several diseases. They are also involved in the
formation and dynamics of membraneless organelles (MLOs) that are important for cellular
biochemistry. Several important open questions remain to be answered regarding the detailed
biophysics of IDPs and MLOs. Addressing these questions is the overall goal of the proposed
work. Building on our past and ongoing efforts in this area, we will carry out work in several
directions. Using peptide and protein systems that are linked to ALS and cancer, we will use
both single-molecule and ensemble experiments to probe important aspects of these systems,
including understanding the interplay of intra- and inter-molecular interactions, effects of
reentrant transitions and asymmetries in the phase diagrams, and aging in droplet systems. We
will also carry out experiments on understanding membrane-induced binding-folding and
aggregation of the Parkinson’s disease related protein α-synuclein. Single-molecule tools will
also be improved or further developed as needed during the project. These directions will also
lead to more complex experiments both in vitro and in cells at later stages of the work or in
future experiments. Overall, the proposed work is anticipated to lead to an improved
understanding of the biophysical mechanisms underlying the cell biology and disease relevance
of these important biological systems.
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DOI:
10.1073/pnas.2210177119
发表时间:
2022-08-09
期刊:
Proceedings of the National Academy of Sciences of the United States of America
影响因子:
11.1
作者:
[]
通讯作者:
DOI:
10.3390/biom13010151
发表时间:
2023-01-11
期刊:
Biomolecules
影响因子:
5.5
作者:
[]
通讯作者:
DOI:
10.1016/j.jmb.2021.167348
发表时间:
2022-01-15
期刊:
Journal of molecular biology
影响因子:
5.6
作者:
[Scholl D, Deniz AA]
通讯作者:
Deniz AA
DOI:
10.1038/s41598-019-48457-x
发表时间:
2019-08-21
期刊:
SCIENTIFIC REPORTS
影响因子:
4.6
作者:
[Onuchic, Paulo L., Minn, Anthony N., Banerjee, Priya R.]
通讯作者:
Banerjee, Priya R.
Biophysics of Protein Disorder and Complexity, Single Molecules to Mesoscales
-
批准号:10320842
-
项目类别:
-
资助金额:$48.38万
-
财政年份:2019
-
负责人:Ashok A Deniz
-
依托单位:
Role of Phase separation by fusion oncoproteins in oncogenesis
-
批准号:10545166
-
项目类别:
-
资助金额:$61.28万
-
财政年份:2019
-
负责人:Ashok A Deniz
-
依托单位:
Role of Phase separation by fusion oncoproteins in oncogenesis
-
批准号:10066334
-
项目类别:
-
资助金额:$65.94万
-
财政年份:2019
-
负责人:Ashok A Deniz
-
依托单位:
Role of Phase separation by fusion oncoproteins in oncogenesis
-
批准号:10305649
-
项目类别:
-
资助金额:$62.72万
-
财政年份:2019
-
负责人:Ashok A Deniz
-
依托单位:
Molecular basis for regulation of CREB by cell stress and retroviral oncoproteins
-
批准号:10053716
-
项目类别:
-
资助金额:$59.92万
-
财政年份:2016
-
负责人:Ashok A Deniz
-
依托单位:
Single-molecule structural studies of unstable amyloidogenic protein oligomers
-
批准号:7771635
-
项目类别:
-
资助金额:$19.98万
-
财政年份:2009
-
负责人:Ashok A Deniz
-
依托单位:
Assembly of Single Biological Molecular Machines
-
批准号:7350167
-
项目类别:
-
资助金额:$34.14万
-
财政年份:2005
-
负责人:Ashok A Deniz
-
依托单位:
Assembly of Single Biological Molecular Machines
-
批准号:7175455
-
项目类别:
-
资助金额:$33.49万
-
财政年份:2005
-
负责人:Ashok A Deniz
-
依托单位:
Assembly of Single Biological Molecular Machines
-
批准号:7012327
-
项目类别:
-
资助金额:$34.49万
-
财政年份:2005
-
负责人:Ashok A Deniz
-
依托单位:
Assembly of Single Biological Molecular Machines
-
批准号:6853975
-
项目类别:
-
资助金额:$35.32万
-
财政年份:2005
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:9023555
-
项目类别:
-
资助金额:$42.23万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:8121134
-
项目类别:
-
资助金额:$9.97万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:7239516
-
项目类别:
-
资助金额:$26.7万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:8036011
-
项目类别:
-
资助金额:$57.4万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:8610825
-
项目类别:
-
资助金额:$42.23万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:8232074
-
项目类别:
-
资助金额:$57.4万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:6558238
-
项目类别:
-
资助金额:$28.16万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:6898249
-
项目类别:
-
资助金额:$28.16万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:7581114
-
项目类别:
-
资助金额:$41.3万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
Single Molecule Studies of Protein Folding Mechanisms
-
批准号:7071801
-
项目类别:
-
资助金额:$27.49万
-
财政年份:2003
-
负责人:Ashok A Deniz
-
依托单位:
海外基金