COMPUTATIONAL INTEL CLUSTERS
COMPUTATIONAL INTEL CLUSTERS
批准号:
6121969
负责人:
THOMAS F COLEMAN
金额:
$1.8万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
1998
资助国家:
美国
项目状态:
已结题
起止时间:
1998-12-01 至 1999-11-30
中文摘要
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英文摘要
One approach to the prediction of protein structure from sequence
defines the native structure as the global energy minimum. Because
the search for the global energy minimum of even a relatively small
protein is impractical in an all-atom approach, during the past few
years we have developed a simplified united-residue representation of
the polypeptide chain. Once the global energy minimum of the
simplified chain has been found, the chain can be converted to an
all-atom chain and the search completed with an all-atom force field,
such as ECEPP/3 used in this work. During this year, we focused our
attention on the final development of the force field to include
multibody or correlation terms that are necessary for the
stabilization of regular secondary structures and developing and
implementing the methods of global optimization to search the
conformational space of the simplified chain. Based on the
distance-scaling method of global optimization, we developed an
efficient and reliable procedure for global optimization that we call
the Basin-to-Deformed-Basin-Coupling method that is based on locating
the regions of significantly low energy by gradually deforming the
energy surface and locating the minima corresponding to the original
potential in these regions by reversing the deformation. At present,
the method is capable of locating the global energy minima of model
polyalanine chains of up to 30 residues in length.
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IMAGE SEGMENT FOR LUNG NODULE DETECTION USING CONSTRAINED OPTIMIZATION
-
批准号:6411729
-
项目类别:
-
资助金额:$1.29万
-
财政年份:2000
-
负责人:THOMAS F COLEMAN
-
依托单位:
IMAGE SEGMENT FOR LUNG NODULE DETECTION USING CONSTRAINED OPTIMIZATION
-
批准号:6309550
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项目类别:
-
资助金额:$2.43万
-
财政年份:1999
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负责人:THOMAS F COLEMAN
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依托单位:
SEGMENTATION OF PULMONARY NODULE IMAGES USING TOTAL VARIATION MINIMIZATION
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批准号:6121972
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项目类别:
-
资助金额:$4.5万
-
财政年份:1998
-
负责人:THOMAS F COLEMAN
-
依托单位:
BEAM & WAVEFORM EFFECTS IN ULTRASONIC IMAGING
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批准号:6253042
-
项目类别:
-
资助金额:$3.61万
-
财政年份:1997
-
负责人:THOMAS F COLEMAN
-
依托单位:
IMAGE SEGMENT FOR LUNG NODULE DETECTION USING CONSTRAINED OPTIMIZATION
-
批准号:6282172
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项目类别:
-
资助金额:$4.25万
-
财政年份:1997
-
负责人:THOMAS F COLEMAN
-
依托单位:
PARALLEL PROCESSING RESOURCE FOR BIOMEDICAL SCIENTISTS
-
批准号:6330636
-
项目类别:
-
资助金额:$90.39万
-
财政年份:1992
-
负责人:THOMAS F COLEMAN
-
依托单位:
PARALLEL PROCESSING RESOURCE FOR BIOMEDICAL SCIENTISTS
-
批准号:6126303
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项目类别:
-
资助金额:$88.41万
-
财政年份:1992
-
负责人:THOMAS F COLEMAN
-
依托单位:
PARALLEL PROCESSING RESOURCE FOR BIOMEDICAL SCIENTISTS
-
批准号:2839484
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项目类别:
-
资助金额:$89.98万
-
财政年份:1992
-
负责人:THOMAS F COLEMAN
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依托单位:
海外基金