Comprehensive Digital Atlas of the Macaque Brain

猕猴大脑综合数字图谱

• 批准号: 6803830
• 负责人: Douglas M. BOWDEN
• 金额: $ 54.21万
• 依托单位: UNIVERSITY OF WASHINGTON
• 依托单位国家: 美国
• 财政年份: 2004
• 资助国家: 美国
• 起止时间: 2004-08-01 至 2008-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/6803830
• 关键词: Internet; Macaca mulatta; bioimaging /biomedical imaging; brain imaging /visualization /scanning; brain mapping; brain metabolism; computer system design /evaluation; digital imaging; educational resource design /development; functional /structural genomics; gene expression; histopathology; informatics; magnetic resonance imaging; neurogenetics; neuropathology; positron emission tomography; publications; sectioning; three dimensional imaging /topography

DESCRIPTION (provided by applicant): This project will enable researchers to map data from studies of the macaque brain over the Web into a fully segmented, high-resolution, spatially indexed, 3-dimensional brain atlas built on basic informatics and neuroanatomic principles. Investigators will be able to visualize and quantify the overlap between areas in which specific genes are expressed, areas of activation revealed by brain imaging (functional MRI or PET scan), classical brain structures and other experimental data, such as, areas containing particular kinds of nerve cells, and areas with connections to certain other brain structures. Noninvasive imaging technologies now allow scientists to scan the whole brain for focal areas of activity associated with specific psychological phenomena. Similarly, modern genomics allows rapid screening of the whole brain for focal areas of gene expression. Such techniques hold great promise for analyzing structure-function relationships in the brain, but they do not reveal the anatomical boundaries of cortical areas well enough for researchers to precisely identify the anatomical locations of activation or genetic involvement. This project will allow researchers to generate template cross-sections of the brain at any angle and position from a 3D digital atlas, modify them to match individual variation, and overlay them on experimental histologic, MRI or PET sections to show the approximate boundaries of structures not visible by those techniques. The informatics component of the project will merge landmark boundaries identified by MRI, block face photos and histological photomicrographs to produce a digital 3-dimensional template atlas of the entire rhesus (Macaca mulatta) brain. The 3D model will reside in the BrainInfo website at the National Primate Research Center at the University of Washington. Researchers at other institutions will be able to map a variety of kinds of data into the atlas over the Web for comparison with data mapped by others. The maps, as well as many other kinds of brain information, will thus be shared with the entire neuroscientific community. 2) The research component of the project will be to map in the nonhuman primate brain the expression of genes that have been implicated in certain human psychiatric disorders. This project will accelerate the communication of new research findings among neuroscientists the world over and will improve our understanding of areas of the brain involved in such disorders as autism and schizophrenia.

描述（由申请人提供）：该项目将使研究人员能够通过网络将猕猴大脑研究的数据映射到基于基本信息学和神经解剖学原理构建的完全分段、高分辨率、空间索引的三维大脑图谱中。研究人员将能够可视化和量化特定基因表达区域之间的重叠，大脑成像（功能性MRI或PET扫描）显示的激活区域，经典的大脑结构和其他实验数据，例如包含特定种类神经细胞的区域，以及与某些其他大脑结构连接的区域。非侵入性成像技术现在允许科学家扫描整个大脑，寻找与特定心理现象相关的活动焦点区域。同样，现代基因组学允许快速筛选整个大脑的基因表达的焦点区域。此类技术在分析大脑结构与功能关系方面前景广阔，但它们不能很好地揭示皮质区域的解剖边界，使研究人员无法精确识别激活或遗传参与的解剖位置。该项目将允许研究人员从3D数字图谱中以任何角度和位置生成大脑的模板横截面，修改它们以匹配个体差异，并将其覆盖在实验组织学，MRI或PET切片上，以显示这些技术不可见的结构的近似边界。该项目的信息学部分将合并MRI识别的标志性边界，块面照片和组织学显微照片，以产生整个恒河猴（Macaca mulatta）大脑的数字三维模板图谱。该3D模型将驻留在华盛顿大学国家灵长类动物研究中心的BrainInfo网站上。其他机构的研究人员将能够通过网络将各种数据映射到地图集中，以便与其他机构映射的数据进行比较。这些图谱，以及许多其他类型的大脑信息，将与整个神经科学界共享。2)该项目的研究部分将是绘制非人类灵长类动物大脑中与某些人类精神疾病有关的基因表达图。该项目将加速全世界神经科学家之间新研究成果的交流，并将提高我们对自闭症和精神分裂症等疾病所涉及的大脑区域的理解。