Computional Brain Biology from Genotype to Phenotype

从基因型到表型的计算脑生物学

基本信息

  • 批准号:
    6706881
  • 负责人:
  • 金额:
    $ 104.27万
  • 依托单位:
  • 依托单位国家:
    美国
  • 项目类别:
  • 财政年份:
    2002
  • 资助国家:
    美国
  • 起止时间:
    2002-02-04 至 2005-01-31
  • 项目状态:
    已结题

项目摘要

DESCRIPTION (provided by applicant): This is a proposal to plan and develop a Program of Excellence in computational biology from genotype to phenotype. This planning grant application includes development projects focusing on mapping brain phenotype, mapping biological structure and mapping genomic function. These will be supported by well-developed Cores: Administration, Computational Resources and Education & Training. The program is an integrated effort with multidisciplinary participants from several different departments including mathematics, computer science, neurology, genetics and biochemistry. The Institute of Pure and Applied Mathematics and the Laboratory of Neuro Imaging provide physical resources and additional infrastructure necessary to create this program. The development projects and the cores each provide a symbiotic contribution from both computation and biology. These projects were established because of their mutually beneficial relationship with one another, as well as with the core support activities and the training and educational opportunities of this campus. Plans include collaboration with other investigators and the creation and nurturing of mini-projects that will emerge and grow to full-fledged development projects. Mapping Brain Phenotype will utilize novel mathematical and computational strategies for analyzing whole brain images to understand brain variability and detecting abnormal patterns. Mapping Biological Structure will utilize partial differential equation based image processing techniques in the study of tomographic data, blood flow simulation, gene expression, micro-array segmentation and geometric computations of brain mapping. Mapping Genomic Function will develop statistical methods for measuring the strength of evidence directly from genomics raw data. The Administration Core will provide the unified coordination necessary to propel a complex program such as proposed here to the next stage as a full-fledged Center of Excellence. The Computational Resources Core will develop resources and make them available to the other entities of this program. The Education and Training Core includes plans to train undergraduate and graduate students, postdoctoral fellows, visiting scientists and faculty from other departments. An outreach component is also included. The focus of this proposal remains fixed on the computational biology of brain and yet the developments that will emerge from this Center of Excellence will have a broad and far-reaching applicability to other disciplines of science.
描述(由申请人提供):这是一份关于规划和发展一个

项目成果

期刊论文数量(20)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Level set method for positron emission tomography.
Genome-wide detection of alternative splicing in expressed sequences using partial order multiple sequence alignment graphs.
使用偏序多序列比对图对表达序列中的选择性剪接进行全基因组检测。
Dynamic cluster formation using level set methods.
使用水平集方法动态聚类形成。
Literature Mapping with PubAtlas - extending PubMed with a 'BLASTing interface'.
使用 PubAtlas 进行文献映射 - 使用“BLASTing 接口”扩展 PubMed。
Targeting alternatively spliced sequence features for cancer diagnosis and therapeutics.
针对癌症诊断和治疗的选择性剪接序列特征。
  • DOI:
    10.1007/bf02990573
  • 发表时间:
    2005
  • 期刊:
  • 影响因子:
    6.3
  • 作者:
    Atanelov,Levan;Xu,Qiang;Rad,Ramin;Lee,Christopher
  • 通讯作者:
    Lee,Christopher
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{{ truncateString('ARTHUR W TOGA', 18)}}的其他基金

High Capacity, High Performance Storage System for Neuroscience
适用于神经科学的大容量、高性能存储系统
  • 批准号:
    10425960
  • 财政年份:
    2022
  • 资助金额:
    $ 104.27万
  • 项目类别:
HABS-HD - Core B - Neuroimaging & Informatics Core
HABS-HD - 核心 B - 神经影像
  • 批准号:
    10493846
  • 财政年份:
    2022
  • 资助金额:
    $ 104.27万
  • 项目类别:
Imaging Core
成像核心
  • 批准号:
    10247461
  • 财政年份:
    2020
  • 资助金额:
    $ 104.27万
  • 项目类别:
Data Management and Statistical Core (DMS)
数据管理和统计核心 (DMS)
  • 批准号:
    10655666
  • 财政年份:
    2020
  • 资助金额:
    $ 104.27万
  • 项目类别:
Data Management and Statistical Core (DMS)
数据管理和统计核心 (DMS)
  • 批准号:
    10247456
  • 财政年份:
    2020
  • 资助金额:
    $ 104.27万
  • 项目类别:
Data Management and Statistical Core (DMS)
数据管理和统计核心 (DMS)
  • 批准号:
    9922629
  • 财政年份:
    2020
  • 资助金额:
    $ 104.27万
  • 项目类别:
Imaging Core
成像核心
  • 批准号:
    10655670
  • 财政年份:
    2020
  • 资助金额:
    $ 104.27万
  • 项目类别:
Imaging Core
成像核心
  • 批准号:
    9922633
  • 财政年份:
    2020
  • 资助金额:
    $ 104.27万
  • 项目类别:
Training in the Multiscale and Multimodal Analysis of Biomarkers in Alzheimer’s Disease
阿尔茨海默病生物标志物的多尺度和多模式分析培训
  • 批准号:
    10628648
  • 财政年份:
    2018
  • 资助金额:
    $ 104.27万
  • 项目类别:
Training for the Multiscale and Multimodal Analysis of Biomarkers in Alzheimer's Disease
阿尔茨海默病生物标志物的多尺度和多模式分析培训
  • 批准号:
    10436893
  • 财政年份:
    2018
  • 资助金额:
    $ 104.27万
  • 项目类别:
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