CONTINUED DEVELOPMENT, PORTING, MAINTENANCE OF 3DVIEWNIX

3DVIEWNIX 的持续开发、移植和维护

• 批准号: 7250133
• 负责人: JAYARAM K UDUPA
• 金额: $ 38.52万
• 依托单位: UNIVERSITY OF PENNSYLVANIA
• 依托单位国家: 美国
• 财政年份: 2004
• 资助国家: 美国
• 起止时间: 2004-09-03 至 2010-06-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7250133
• 关键词: CONTINUED; DEVELOPMENT; PORTING; MAINTENANCE; 3DVIEWNIX

DESCRIPTION (provided by applicant): The broad goal of this project is to develop, test, evaluate, maintain, document, and distribute a comprehensive software system for the Computer Aided Visualization and Analysis (CAVA) of multidimensional medical images. The open source software systems currently available for CAVA have four key limitations: (1) They have been developed either for mostly image processing or for mostly visualization, and very minimally for structure manipulation and analysis. Systems encompassing all four elements of processing in a comprehensive manner do not exist at present. (2) Their usability by basic scientists as well as biomedical researchers has serious limitations. (3) They have serious speed limitations. (4) They lack interoperable, portable interfaces to other software packages and peripheral hardware. By utilizing a previously developed software system called 3DVIEWNIX, the aim of this project is to develop a new open-source/conditional open-source system called CAVA software system (CAVASS) that will effectively overcome the above limitations. To achieve these goals, all libraries of 3DVIEWNIX will be ported from its current Linux/Unix environment to include also Windows and Mac OS. For key CAVA operations that have computational bottlenecks, parallelized implementations will be developed so that the speed issue can be resolved in a portable manner in multiprocessor systems. The Graphical User Interface and the graphics interface of 3DVIEWNIX will be updated utilizing wxWindows so as to provide a portable stereo visualization interface by employing inexpensive hardware (such as shutter glasses) and easy means to interface to other systems such as ITK, Matlab, Mathematica, and CAD/CAM and statistical packages. CAVASS will be developed in such a manner that it will not only provide a rich resource of all CAVA functions but will also serve different user groups unlike existing open-source software systems. This will include researchers involved in the development of the basic science and technology of CAVA, developers of biomedical applications of CAVA, and biomedical end users who wish to use the software system in clinical/biomedical research.

描述（由申请人提供）： 该项目的总体目标是开发、测试、评估、维护、记录和分发用于多维医学图像计算机辅助可视化和分析 (CAVA) 的综合软件系统。目前可用于 CAVA 的开源软件系统有四个主要局限性：（1）它们主要是为图像处理或可视化而开发的，并且很少用于结构操作和分析。目前还不存在以全面的方式涵盖所有四个处理要素的系统。 (2) 基础科学家和生物医学研究人员对它们的可用性有严重的限制。 (3) 其速度受到严重限制。 (4) 它们缺乏与其他软件包和外围硬件的可互操作的、可移植的接口。通过利用先前开发的名为 3DVIEWNIX 的软件系统，该项目的目的是开发一种名为 CAVA 软件系统（CAVASS）的新开源/条件开源系统，该系统将有效克服上述限制。 为了实现这些目标，3DVIEWNIX 的所有库都将从当前的 Linux/Unix 环境移植到 Windows 和 Mac OS。对于具有计算瓶颈的关键CAVA操作，将开发并行化实现，以便可以在多处理器系统中以可移植的方式解决速度问题。图形用户界面和 3DVIEWNIX 的图形界面将利用 wxWindows 进行更新，以便通过使用廉价的硬件（例如快门眼镜）和与其他系统（例如 ITK、Matlab、Mathematica、CAD/CAM 和统计软件包）接口的简单方法来提供便携式立体可视化界面。 CAVASS的开发方式将不仅提供所有CAVA功能的丰富资源，而且与现有的开源软件系统不同，它还将服务于不同的用户群体。这将包括参与CAVA基础科学和技术开发的研究人员、CAVA生物医学应用的开发人员以及希望在临床/生物医学研究中使用该软件系统的生物医学最终用户。

项目成果

Efficient computation of enclosed volume and surface area from the same triangulated surface representation.

根据相同的三角表面表示有效计算封闭体积和表面积。

• DOI: 10.1016/j.compmedimag.2010.11.001
• 发表时间: 2011
• 期刊: Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
• 作者: Nystrom,Ingela;Grevera,GeorgeJ;Hirsch,BruceE;Udupa,JayaramK
• 通讯作者: Udupa,JayaramK

CAVASS: a computer-assisted visualization and analysis software system.

• DOI: 10.1007/s10278-007-9060-5
• 发表时间: 2007-11
• 期刊: JOURNAL OF DIGITAL IMAGING
• 影响因子: 4.4
• 作者: Grevera, George;Udupa, Jayaram;Odhner, Dewey;Zhuge, Ying;Souza, Andre;Iwanaga, Tad;Mishra, Shipra
• 通讯作者: Mishra, Shipra

Intensity Standardization Simplifies Brain MR Image Segmentation.

强度标准化简化了大脑 MR 图像分割。

• DOI: 10.1016/j.cviu.2009.06.003
• 发表时间: 2009
• 期刊: Computer vision and image understanding : CVIU
• 作者: Zhuge,Ying;Udupa,JayaramK
• 通讯作者: Udupa,JayaramK