Gene Candidates for Embryonic Lethals in the The Mouse T-complex
Gene Candidates for Embryonic Lethals in the The Mouse T-complex
批准号:
7592023
负责人:
Ramaiah Nagaraja
金额:
$6.15万
依托单位国家:
美国
项目类别:
财政年份:
--
资助国家:
美国
项目状态:
未结题
起止时间:
至
关键词:
AttentionBacterial Artificial ChromosomesCandidate Disease GeneCellsChromosome MappingChromosomes, Human, Pair 17ClassificationComplexCytoplasmDatabasesDepositionDevelopmentEmbryoEmbryonic DevelopmentEmbryonic Lethal MutationEpitopesGenesGoalsHomologous GeneHumanKidneyLengthLocalizedLungMapsMetalloendopeptidasesMetalloproteasesMusMutateMutationOpen Reading FramesOryctolagus cuniculusPhysical Map of the Human GenomePlayProtein IsoformsRNA SplicingRoleSequence Tagged SitesStagingSyndromeTissuesTranslationsZincbaseimmunocytochemistryintercellular communicationinterestmouse genomephysical mappingpolyclonal antibodyprotein function
中文摘要
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英文摘要
From a sequence tagged site (STS)/Bacterial Artificial Chromosome based physical map in mouse t-complex region 43 BACs were representing a minimal tiling path were selected, sequenced, annotated and deposited into the public databases. Based on the physical map the tw5 embryonic lethal locus mutation was refined to a single, 175 Kb BAC. Histological studies have demonstrated that mice homozygous for tw5 die at the gastrulation stage. The candidate BAC rescues the tw5 lethality, restoring viability. Our collaborator Dr. K. Abe is currently focusing on the search for the gene mutated in the tw5 embryonic lethality. Currently, we have focused our attention on the mouse homolog of human ADAMTS10 gene, which maps to the interval. Several metalloproteases play critical roles in cell-cell signal transduction. ADAMTS-10 gene, a zinc metalloendopeptidase with thrombospondin domains, is a potential candidate for important functions during development. Recently ADAMTS10 was found to be a candidate gene for Weill-Marchesani syndrome (MIM#277600). Previously we found that mouse ADAMTS-10 is alternatively spliced in a tissue-specific manner and encodes protein isoforms that either include or exclude the thrombospondin domains by truncation of the open reading frame. We have cloned and characterized 3 major isoforms from embryo, kidney and lung, and find that the embryo, for example, expresses an isoform that has a truncated translation product. The truncated embryonic and full-length kidney isoforms were transfected into 293 cells. We find that both isoforms are stably expressed and localize to the cytoplasm, as determined by immunocytochemistry. Rabbit polyclonal antibodies were generated targeted to epitopes that could distinguish between different isoforms and are being purified and characterized for further use to define the protein function.
期刊论文(2)
专著(0)
科研奖励(0)
会议论文
Gene content of the 750-kb critical region for mouse embryonic ectoderm lethal tcl-w5.
小鼠胚胎外胚层致死 tcl-w5 的 750 kb 关键区域的基因内容。
DOI:
10.1007/s00335-003-2329-1
发表时间:
2004
期刊:
Mammalian genome : official journal of the International Mammalian Genome Society
影响因子:
--
作者:
[Abe,Kuniya, Yuzuriha,Misako, Sugimoto,Michihiko, Ko,MinoruSH, Brathwaite,Mgavi, Waeltz,Paul, Nagaraja,Ramaiah]
通讯作者:
Nagaraja,Ramaiah
Eleven densely clustered genes, six of them novel, in 176 kb of mouse t-complex DNA.
176 kb 的小鼠 T 复合体 DNA 中有 11 个密集聚集的基因,其中 6 个是新基因。
DOI:
10.1101/gr.10.7.916
发表时间:
2000
期刊:
Genome research
影响因子:
7
作者:
[Kargul,GJ, Nagaraja,R, Shimada,T, Grahovac,MJ, Lim,MK, Nakashima,H, Waeltz,P, Ma,P, Chen,E, Schlessinger,D, Ko,MS]
通讯作者:
Ko,MS
TRANSLOCATIONS/GENES ASSOCIATED WITH PREMATURE OVARIAN FAILURE
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批准号:6288732
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项目类别:
-
资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Mapping and Gene Content of the Mouse t-complex
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批准号:6097860
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项目类别:
-
资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Long-Range Transcriptional Regulation of Placental and Ovary Specific Genes
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批准号:8552428
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项目类别:
-
资助金额:$54.66万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Translocations/genes associated with Premature Ovarian Failure
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批准号:6431442
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Genes Assoc With Ovarian Develop /Premature Ovarian Fail
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批准号:6969324
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项目类别:
-
资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Long-Range Transcriptional Regulation of Placental and Ovary Specific Genes
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批准号:7592024
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项目类别:
-
资助金额:$23.29万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Long-Range Transcriptional Regulation of Placental and Ovary Specific Genes
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批准号:8931557
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项目类别:
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资助金额:$62.76万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Recovery And Study Of Yeast Artificial Chromosomes
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批准号:6815258
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Translocations/genes in Premature Ovarian Failure
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批准号:6815261
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项目类别:
-
资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Placenta specific and ribosomal RNA genes: structure and function
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批准号:9549319
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项目类别:
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资助金额:$68.77万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Placenta specific and ribosomal RNA genes: structure and function
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批准号:10688842
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项目类别:
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资助金额:$101.6万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Long-Range Transcriptional Regulation of Placental and Ovary Specific Genes
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批准号:7732269
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项目类别:
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资助金额:$37.57万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Placenta specific and ribosomal RNA genes: structure and function
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批准号:10471683
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项目类别:
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资助金额:$100.53万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Recovery of Yeast Artificial Chromosomes in Circularized Form
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批准号:6431441
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Mapping and Gene Content of the Mouse t-complex
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批准号:6431439
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Mapping And Gene Content Of The Mouse T-complex
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批准号:6667968
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项目类别:
-
资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Translocations/genes Associated With Premature Ovarian F
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批准号:6667978
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Transcription Regulation of Placental /Ovary Specific Ge
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批准号:6969323
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Long-Range Transcriptional Regulation of Placental and O
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批准号:7132298
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项目类别:
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资助金额:$0.0万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
Long-Range Transcriptional Regulation of Placental and Ovary Specific Genes
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批准号:9147312
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项目类别:
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资助金额:$55.16万
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财政年份:--
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负责人:Ramaiah Nagaraja
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依托单位:
海外基金