Proteome-wide Expression Study of Osteogenic Cells
Proteome-wide Expression Study of Osteogenic Cells
批准号:
7936857
负责人:
HONG-WEN DENG
金额:
$1.94万
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-08-01 至 2012-07-31
关键词:
AgeAliquotAntibodiesArtsBiologicalBiological AssayBlood specimenBone DensityBone MarrowBone ResorptionCaucasiansCaucasoid RaceCellsChinese PeopleChromosome MappingClinicalCluster AnalysisComplexDataDiagnosticEventFemaleGenderGene ProteinsGenesGeneticGenetic PolymorphismGenomeGenomicsGoalsHealthHeritabilityHuman GeneticsLifeLinkLiquid ChromatographyMechanicsMenopauseMesenchymal Stem CellsMessenger RNAMetabolic PathwayMolecularMolecular ProfilingNegative FindingOsteoblastsOsteoclastsOsteocytesOsteogenesisOsteoporosisOutcomePathway interactionsPhenotypePhysiologyPopulationPostmenopausePrognostic MarkerProteinsProteomeProteomicsPublic HealthPublishingRecruitment ActivityRelative (related person)ResearchResearch PersonnelRiskSamplingScanningSignal TransductionSpecificityTestingTimeUnited States National Institutes of HealthVariantWestern BlottingWomanagedbasebonebone cellbone lossbone metabolismclinical applicationdesignexperiencefunctional genomicsgenetic epidemiologygenetic linkagehuman subjectinnovationmalemenmonocytenanonovelnumb proteinosteoclastogenesisosteogenicoutcome forecastperipheral bloodprogramsprotein expressionresearch studysextandem mass spectrometrytooltrait
中文摘要
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英文摘要
Osteoporosis is a major public health problem, especially in women. It is mainly characterized by low bone
mineral density (BMD). BMD has high heritability of > 60%. Women have much lower BMD than men. We and others
demonstrated that some BMD genes/genomic regions are gender specific. Menopause is a most significant
physiology event in female's life and is associated with female-specific rapid bone loss.
Bone marrow mesenchymal stem cells (BMMSCs) and peripheral blood monocytes (PBMs), are precursors for
osteoblasts (bone formation cells) and osteoclasts (bone resorption cells), respectively.
Our hypothesis is that changes in the protein expression profiles in female BMMSCs and PBMs underlie
mechanisms of female BMD variation and are associated with menopause.
Our major goals here are to identify proteins differentially expressed in BMMSCs and PBMs in women: 1) with
high vs. low BMD; 2) before and after menopause, and thus identify proteins (and their genes) associated with
female osteoporosis and menopause in BMMSCs and PBMs. The proteins identified significant in females will be
examined in male samples.
Together with Project 2, we will recruit 80 otherwise healthy females and 80 age-matched otherwise healthy
males aged 50-55, including 40 subjects with low and 40 with high BMD (age matched population bottom or top 20%
respectively) for each sex, all Caucasian. Each female BMD group includes 20 pre- and 20 age matched
post-menopausal women. We will take fresh bone marrow (for which we have had extensive published research
experience) and peripheral blood samples from each subject. BMMSCs and PBMs will be isolated and equally
divided into two aliquots, one for Project 2 and one for Project 3. In this Project 3, we will extract the total proteins
from aliquots of isolated BMMSCs and PBMs. Proteomic profiling experiments and analyses will be performed on
Females using MD-nano-LC-MS/MS. Significant differentially expressed proteins identified will be verified by
Western blotting with female samples for their importance in females. Significant proteins verified in females will
be examined by Western blotting with male samples for sex-specificity.
The results obtained in Caucasians will be cross checked for ethnic generality/specificity in Chinese samples.
The molecular and cellular functional studies of the identified proteins and their genes will be pursued as exemplified
in Project 2 of this SCOR.
The major results (particularly those obtained from PBMs) of this study may be used to design customary
diagnostic protein antibody chips and/or protein markers for prognosis of female osteoporosis. In particular, the
results will be used to provide some functional evidence, when combined with the DMA polymorphism data in
Project 1 and DMA microarray data in Project 2 of this SCOR to powerfully and efficiently identify genes and some
of their functions for female osteoporosis.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
Project 1: Genome Wide Sequencing for Osteoporosis Risk Genes in Males
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批准号:10180818
-
项目类别:
-
资助金额:$72.49万
-
财政年份:2017
-
负责人:HONG-WEN DENG
-
依托单位:
Decoding Methylation Mediated Epigenomic Contributions to Male Osteoporosis
-
批准号:9905489
-
项目类别:
-
资助金额:$62.0万
-
财政年份:2017
-
负责人:HONG-WEN DENG
-
依托单位:
Trans-omics integration of multi-omics studies for male osteoporosis
-
批准号:10216820
-
项目类别:
-
资助金额:$181.93万
-
财政年份:2017
-
负责人:HONG-WEN DENG
-
依托单位:
Trans-omics integration of multi-omics studies for male osteoporosis
-
批准号:10180814
-
项目类别:
-
资助金额:$170.58万
-
财政年份:2017
-
负责人:HONG-WEN DENG
-
依托单位:
Administrative Core
-
批准号:10180815
-
项目类别:
-
资助金额:$20.55万
-
财政年份:2017
-
负责人:HONG-WEN DENG
-
依托单位:
Trans-omics integration of multi-omics studies for male osteoporosis
-
批准号:9916677
-
项目类别:
-
资助金额:$154.07万
-
财政年份:2017
-
负责人:HONG-WEN DENG
-
依托单位:
Epigenomewide DNA Methylation Study for Osteoporosis Risk
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批准号:9138957
-
项目类别:
-
资助金额:$60.55万
-
财政年份:2012
-
负责人:HONG-WEN DENG
-
依托单位:
Epigenomewide DNA Methylation Study for Osteoporosis Risk
-
批准号:8368888
-
项目类别:
-
资助金额:$65.12万
-
财政年份:2012
-
负责人:HONG-WEN DENG
-
依托单位:
Epigenomewide DNA Methylation Study for Osteoporosis Risk
-
批准号:8536726
-
项目类别:
-
资助金额:$59.4万
-
财政年份:2012
-
负责人:HONG-WEN DENG
-
依托单位:
Genome Wide Scans for Female Osteoporosis
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批准号:8326789
-
项目类别:
-
资助金额:$5.97万
-
财政年份:2011
-
负责人:HONG-WEN DENG
-
依托单位:
OD Co-funding (-03 Budget Period)
-
批准号:8326792
-
项目类别:
-
资助金额:$97.5万
-
财政年份:2011
-
负责人:HONG-WEN DENG
-
依托单位:
Identification of Proteins Important for Male Osteoporosis
-
批准号:8143422
-
项目类别:
-
资助金额:$62.0万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
Genetics of Osteoporotic Fractures in Chinese
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批准号:8117113
-
项目类别:
-
资助金额:$6.33万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
Genome-wide association study of periodontitis
-
批准号:8311274
-
项目类别:
-
资助金额:$1.73万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
Identification of Proteins Important for Male Osteoporosis
-
批准号:8535075
-
项目类别:
-
资助金额:$53.71万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
Identification of Proteins Important for Male Osteoporosis
-
批准号:7742808
-
项目类别:
-
资助金额:$65.93万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
Identification of Proteins Important for Male Osteoporosis
-
批准号:8259560
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
OD Co-funding (-03 Budget Period)
-
批准号:7936858
-
项目类别:
-
资助金额:$97.5万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
Biostatistics and Bioinformatics Core
-
批准号:7936860
-
项目类别:
-
资助金额:$2.72万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
Genome Wide Scans for Female Osteoporosis
-
批准号:7936855
-
项目类别:
-
资助金额:$3.27万
-
财政年份:2009
-
负责人:HONG-WEN DENG
-
依托单位:
海外基金