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This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. Plasma HDL cholesterol levels (HDL-C) are an independent predictor of coronary artery disease (CAD). We have completed a genome-wide linkage scan for HDL-C in a US cohort consisting of 388 multiplex families with premature CAD (GeneQuest). The heritability of HDL-C in GeneQuest was 0.37 with gender and age as covariates (P = 5.1 x 10(-4)). Two major quantitative trait loci (QTL) for log-transformed HDL-C adjusted for age and gender were identified onto chromosomes 7p22 and 15q25 with maximum multipoint logarithm of odds (LOD) scores of 3.76 and 6.69, respectively. Fine mapping decreased the 7p22 LOD score to a nonsignificant level of 3.09 and split the 15q25 QTL into two loci, one minor QTL on 15q22 (LOD = 2.73) that spanned the LIPC gene, and the other at 15q25 (LOD = 5.63). A family-based quantitative transmission disequilibrium test (QTDT) revealed significant association between variant rs1800588 in LIPC and HDL-C in the GeneQuest population (P = 0.0067), which may account for the minor QTL on 15q22. The 15q25 QTL is the most significant locus identified for HDL-C to date, and these results provide a framework for the ultimate identification of the underlying HDL-C variant and gene on chromosomes 15q25, which will provide insights into novel regulatory mechanisms of HDL-C metabolism.
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HUMAN GENETIC ANALYSIS RESOURCE
  • 批准号:
    8364163
  • 项目类别:
  • 资助金额:
    $13.09万
  • 财政年份:
    2011
  • 负责人:
    Robert C. Elston
  • 依托单位:
TRAINING IN GENETIC EPIDEMIOLOGY & USE OF SAGE
  • 批准号:
    8171713
  • 项目类别:
  • 资助金额:
    $9.88万
  • 财政年份:
    2010
  • 负责人:
    Robert C. Elston
  • 依托单位:
DESIGN OF LINKAGE STUDIES
  • 批准号:
    8171735
  • 项目类别:
  • 资助金额:
    $0.49万
  • 财政年份:
    2010
  • 负责人:
    Robert C. Elston
  • 依托单位:
GENOTYPE AND COPY NUMBER CALLING
  • 批准号:
    8171736
  • 项目类别:
  • 资助金额:
    $0.49万
  • 财政年份:
    2010
  • 负责人:
    Robert C. Elston
  • 依托单位:
国内基金
海外基金
染色体15q25区段遗传多态与肺癌易感性的分子流行病学研究
  • 批准号:
    30901233
  • 项目类别:
    青年科学基金项目
  • 资助金额:
    20.0万元
  • 批准年份:
    2009
  • 负责人:
    马红霞
  • 依托单位: