ATOMIC FORCE MICROSCOPY OF BIOPOLYMERS
ATOMIC FORCE MICROSCOPY OF BIOPOLYMERS
批准号:
8365490
负责人:
Catherine E. Costello
金额:
$1.85万
依托单位国家:
美国
项目类别:
财政年份:
2011
资助国家:
美国
项目状态:
已结题
起止时间:
2011-06-01 至 2012-08-09
关键词:
Amino Acid SequenceAmyloid FibrilsAmyloid ProteinsAmyloidosisAtomic Force MicroscopyBiologyBiophysicsBiopolymersBostonCalibrationCarbon NanotubesCollagenComplementComplexDevelopmentDevicesDoctor of PhilosophyFundingGAG GeneGoalsGrantImageIndividualMaintenanceManuscriptsMass Spectrum AnalysisMeasurementMeasuresMedicineMolecularMolecular WeightMonitorMucinsNational Center for Research ResourcesOrganPatientsPost-Translational Protein ProcessingPrincipal InvestigatorPropertyProteinsProteoglycanRecombinantsResearchResearch InfrastructureResolutionResourcesSamplingSourceSupervisionTestingTissuesTrainingTubeUnited States National Institutes of HealthUniversitiesVariantWeightamyloid fibril formationbasecostglycosylationimprovedinstrumentoperationsingle moleculetool
中文摘要
这个子项目是许多利用资源的研究子项目之一
由NIH/NCRR资助的中心拨款提供。子项目的主要支持
而子项目的主要调查员可能是由其他来源提供的,
包括其它NIH来源。 列出的子项目总成本可能
代表子项目使用的中心基础设施的估计数量,
而不是由NCRR赠款提供给子项目或子项目工作人员的直接资金。
BUSM MS资源进行原子力显微镜,以补充高分子量的单个生物聚合物的质谱研究,包括,例如,蛋白聚糖、胶原和具有胶原型结构域的分子,以及含有高水平糖基化的其它蛋白质,以及非共价复合物。原子力显微镜正被用来估计这些物种的总重量和模块组成的基础上,外推的校准曲线的范围内可通过质谱仪。本项目的目的是利用原子力显微镜快速估计大分子和复合物的分子量,作为质谱在高分子量范围内的补充工具。这是通过使用AFM测量已知MW的单分子的分子体积作为标准,使用不同MW的生物聚合物标准外推曲线,并确定分子体积和MW之间的关系来实现的。原子力显微镜还被用于表征淀粉样纤维,目标是将纤维性质与氨基酸序列的变化和组成蛋白的翻译后修饰联系起来。 通过使用纯化的患者样品以及重组淀粉样蛋白,在该开发项目和几个合作项目(例如,Nugent,Skinner,Trinkaus-Randall).从原发性淀粉样蛋白病患者的器官组织中获得的淀粉样蛋白原纤维也记录了AFM图像。不久将提交一份介绍最近成果的手稿。为了提高原子力显微镜测量的分辨率,正在探索使用碳纳米管和安装管的设备已经构建和测试。
仪器的日常操作、维护、培训和监督由洪博士负责,他在波士顿大学医学系完成了博士学位。细胞生物物理学的重点是粘蛋白的AFM研究。
英文摘要
This subproject is one of many research subprojects utilizing the resources
provided by a Center grant funded by NIH/NCRR. Primary support for the subproject
and the subproject's principal investigator may have been provided by other sources,
including other NIH sources. The Total Cost listed for the subproject likely
represents the estimated amount of Center infrastructure utilized by the subproject,
not direct funding provided by the NCRR grant to the subproject or subproject staff.
The BUSM MS Resource carries out atomic force microscopy to complement mass spectrometry studies of individual biopolymers of high molecular weight, including, e.g., proteoglycans, collagens and molecules having collagen-type domains, and other proteins that contain high levels of glycosylation, as well as non-covalent complexes. AFM is being used to estimate the overall weight and modular composition of such species, on the basis of extrapolations of calibration curves over the range accessible by mass spectrometry. The aim of this project is to use AFM to quickly estimate the MWs of large molecules and complexes as a supplemental tool for mass spectrometry in the high molecular weight range. This is achieved by using AFM to measure the molecular volume of single molecules of known MW as standards, extrapolating a curve using biopolymer standards at different MW, and determining the relation between molecular volume and MW. AFM is also being used to characterize amyloid fibrils, with the goal of relating fibril properties to variations in the amino acid sequence and to posttranslational modifications of the constituent proteins. By using purified patient samples as well as recombinant amyloid proteins, the formation of amyloid fibrils under different conditions and protein/GAG interactions is monitored in both this development project and in several collaborative projects (e.g., Nugent, Skinner, Trinkaus-Randall). AFM images have also been recorded for amyloid fibrils obtained from organ tissues of patients who have succumbed to primary amyloid disease. A manuscript describing recent results will be submitted shortly. To improve resolution in AFM measurements, the use of carbon nanotubes is being explored and a device for mounting the tubes has been constructed and tested.
Day-to-day operation, maintenance, training and supervision of the instrument are the responsibility of Dr. Hong, who completed his PhD in the Boston University Dept. of Cellular Biophysics with a focus on AFM studies of mucins.
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Legacy Support During Closure of the Mass Spectrometry Resource for Biology and Medicine
-
批准号:10204050
-
项目类别:
-
资助金额:$53.99万
-
财政年份:2019
-
负责人:Catherine E. Costello
-
依托单位:
Legacy Support During Closure of the Mass Spectrometry Resource for Biology and Medicine
-
批准号:9976561
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项目类别:
-
资助金额:$70.81万
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财政年份:2019
-
负责人:Catherine E. Costello
-
依托单位:
Legacy Support During Closure of the Mass Spectrometry Resource for Biology and Medicine
-
批准号:9810729
-
项目类别:
-
资助金额:$82.73万
-
财政年份:2019
-
负责人:Catherine E. Costello
-
依托单位:
MALDI-TOF/TOF MS TO SUPPORT BIOMEDICAL RESEARCH
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批准号:8247392
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项目类别:
-
资助金额:$59.0万
-
财政年份:2012
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负责人:Catherine E. Costello
-
依托单位:
PROTEIN CYSTEINE POST-TRANSLATIONAL MODIFICATION IN AMYLOIDOSIS
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批准号:8365496
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项目类别:
-
资助金额:$0.46万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
BUSM SEMINARS, LECTURES AND SABBATICAL ON MASS SPECTROMETRY
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批准号:8365520
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项目类别:
-
资助金额:$0.46万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
MICROSCALE SAMPLE PREPARATION FOR MASS SPECTROMETRY
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批准号:8365509
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项目类别:
-
资助金额:$0.38万
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财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
OXIDATIVE POST-TRANSLATIONAL MODIFICATIONS IN CARDIOVASCULAR DISEASE
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批准号:8365547
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项目类别:
-
资助金额:$2.0万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
ELECTRON TRANSFER DISSOCIATION OF GLYCANS AND GLYCOCONJUGATES
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批准号:8365562
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项目类别:
-
资助金额:$5.08万
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财政年份:2011
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负责人:Catherine E. Costello
-
依托单位:
LIPID METABOLITES AND PATHWAYS STRATEGY CONSORTIUM
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批准号:8365525
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项目类别:
-
资助金额:$0.19万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
LC-MSN METHOD FOR QUALITATIVE & QUANTITATIVE ANALYSIS OF COMPLEX LIPID MIXTURES
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批准号:8365492
-
项目类别:
-
资助金额:$1.42万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
VIBRATIONALLY COOLED MALDI, TLC MALDI FTMS FOR GANGLIOSIDES, NEUTRAL GLYCOLIPIDS
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批准号:8365495
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项目类别:
-
资助金额:$0.85万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
MALDI & ESI & LC ESI QQTOF AND LC ESI LTQ-ORBITRAP MS TRAINING
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批准号:8365512
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项目类别:
-
资助金额:$0.92万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
MODIFICATION OF CARDIOVASCULAR PROTEINS BY METABOLIC DISEASE
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批准号:8365586
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项目类别:
-
资助金额:$1.92万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
IMPROVEMENTS IN PROTOCOLS FOR PHOSPHOPEPTIDE MAPPING
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批准号:8365493
-
项目类别:
-
资助金额:$1.85万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
DETECTION AND ANALYSIS OF PEPTIDES/PROTEINS WITH O-LINKED MODIFICATIONS
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批准号:8365526
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项目类别:
-
资助金额:$0.77万
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财政年份:2011
-
负责人:Catherine E. Costello
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依托单位:
OLIGOMER FORMATION BY A-BETA PEPTIDES FOLLOWED BY AFM AND FTMS
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批准号:8365589
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项目类别:
-
资助金额:$0.77万
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财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
IMPROVEMENTS IN PROCEDURES FOR PER-O-METHYLATION OF CARBOHYDRATES
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批准号:8365491
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项目类别:
-
资助金额:$0.23万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
LECTURES AND SEMINARS AT US AND CANADIAN UNIVERSITIES AND RESEARCH FACILITIES
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批准号:8365516
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项目类别:
-
资助金额:$0.54万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
BOSTON GLYCOBIOLOGY DISCUSSION GROUP AND SOCIETY FOR GLYCOBIOLOGY PRESENTATIONS
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批准号:8365518
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项目类别:
-
资助金额:$0.31万
-
财政年份:2011
-
负责人:Catherine E. Costello
-
依托单位:
海外基金