Metabolomic Quantitative Trait Locus (mQTL) Genetic Mapping in Human CVD
Metabolomic Quantitative Trait Locus (mQTL) Genetic Mapping in Human CVD
批准号:
8470689
负责人:
Svati H. Shah
金额:
$55.25万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-07-15 至 2016-05-31
关键词:
9p21AngiographyArchitectureBiologicalBranched-Chain Amino AcidsCandidate Disease GeneCardiovascular DiseasesCardiovascular systemCatabolismCause of DeathChromosome MappingChromosomesClinical ResearchComorbidityComplexComputer SimulationCoronaryCoronary ArteriosclerosisDNA ResequencingDataData SetDetectionDeveloping CountriesDiabetes MellitusDisciplineDiseaseDisease susceptibilityEnrollmentEpidemicEvaluationEventFamilyFoundationsFunctional disorderFutureGenesGeneticGenetic ScreeningGenotypeGoalsHeritabilityHeterogeneityHumanInborn Errors of MetabolismIndividualMapsMeasurementMediatingMetabolicMetabolic PathwayMetabolismMethodsMitochondriaMolecularNatureObesityPathway interactionsPhenotypePlasmaPopulationPreventivePrincipal Component AnalysisPublic HealthQuantitative Trait LociReportingResearch DesignResearch PersonnelResolutionRiskRisk FactorsRoleSNP genotypingSusceptibility GeneTechnologyTestingTrainingValidationVariantanalytical toolbasebiobankclinical phenotypecohortdisease diagnosisdisorder riskearly onsetfatty acid oxidationgenetic variantgenome wide association studygenome-wideinsightmetabolomicsnovelnovel strategiesperipheral bloodresponsesmall moleculetooltraiturea cycle
中文摘要
冠状动脉疾病(CAD)是美国死亡的主要原因,并与流行病相一致
英文摘要
Coronary artery disease (CAD) is the leading cause of the death in the US and, in concert with the epidemic
of obesity and diabetes, is becoming the leading cause of death in many developing countries. The genetic
predilection of CAD is well-established. Despite this, the genetics of CAD remain largely unknown. Given the
complex nature of CAD, evaluation of the disease with more comprehensive analytical tools may provide
needed insights into biological pathways converging on this heterogeneous phenotype. Many of the
commonly accepted risk factors for CAD are metabolic. Metabolomics, the study of small-molecule
metabolites, is an emerging discipline that may be particularly useful for understanding metabolic imbalances
and for diagnosis of disease. Using these granular metabolic phenotypes, which reflect biological responses
to exogenous and endogenous inputs, in a genetic screen may provide more a more powerful method for
uncovering molecular mechanisms of cardiovascular disease.
We have previously shown a novel finding of high heritabilities of metabolomic profiles in families
burdened with early-onset CAD, suggesting a genetic basis to these metabolite profiles. Furthermore, we
have shown that these metabolomic profiles strongly, and independently, discriminate individuals with CAD
from those without, and predict risk of future cardiovascular events. Therefore, we propose to perform
metabolic quantitative trait loci (mQTL) mapping in a large, well-phenotyped cardiovascular cohort
using genomewide association (GWAS) and targeted, quantitative metabolic profiling, with the goal of
elucidating the underlying genetic architecture of metabolic traits predisposing to CAD. We
hypothesize that metabolomic profiling in this cohort will identify novel phenotypes underlying CAD
pathophysiology, and that mQTL mapping will identify novel genes for CAD risk mediated through metabolic
pathways. The specific aims of this proposal are to: (1) perform targeted, quantitative metabolic profiling in a
well-phenotyped cardiovascular cohort of 1000 individuals; (2) perform genomewide association (GWAS) in
the same cardiovascular cohort of 1000 individuals and perform genetic mapping to identify metabolic
quantitative trait loci (mQTLs); (3) replicate GWAS findings in silico and in independent familial and nonfamilial
cardiovascular cohorts; and (4) resequence candidate loci identified from Aims 2 and 3 to identify
novel genetic variants. This proposal has the potential for having a significant impact on a major public
health problem that has a very strong heritable component that is poorly
期刊论文(4)
专著(0)
科研奖励(0)
会议论文
DOI:
10.3389/fgene.2021.661497
发表时间:
2021
期刊:
Frontiers in genetics
影响因子:
3.7
作者:
[Dungan JR, Qin X, Hurdle M, Haynes CS, Hauser ER, Kraus WE]
通讯作者:
Kraus WE
DOI:
10.1007/s11897-016-0289-5
发表时间:
2016-06
期刊:
Current heart failure reports
影响因子:
--
作者:
[Hunter WG, Kelly JP, McGarrah RW 3rd, Kraus WE, Shah SH]
通讯作者:
Shah SH
DOI:
10.1161/jaha.115.003190
发表时间:
2016-07-29
期刊:
Journal of the American Heart Association
影响因子:
5.4
作者:
[Hunter WG, Kelly JP, McGarrah RW 3rd, Khouri MG, Craig D, Haynes C, Ilkayeva O, Stevens RD, Bain JR, Muehlbauer MJ, Newgard CB, Felker GM, Hernandez AF, Velazquez EJ, Kraus WE, Shah SH]
通讯作者:
Shah SH
Immunogenetic Profiling for Risk of Primary Graft Dysfunction after Heart Transplantation
-
批准号:10391731
-
项目类别:
-
资助金额:$20.13万
-
财政年份:2021
-
负责人:Svati H. Shah
-
依托单位:
Immunogenetic Profiling for Risk of Primary Graft Dysfunction after Heart Transplantation
-
批准号:10515335
-
项目类别:
-
资助金额:$24.15万
-
财政年份:2021
-
负责人:Svati H. Shah
-
依托单位:
Inflammatory and Metabolic Biomarkers in Cardiovascular Complications with SARS-CoV-2
-
批准号:10303644
-
项目类别:
-
资助金额:$25.59万
-
财政年份:2021
-
负责人:Svati H. Shah
-
依托单位:
Inflammatory and Metabolic Biomarkers in Cardiovascular Complications with SARS-CoV-2
-
批准号:10426342
-
项目类别:
-
资助金额:$20.04万
-
财政年份:2021
-
负责人:Svati H. Shah
-
依托单位:
A Personalized Metabolomic Approach to Human Obesity and Weight Loss
-
批准号:9196377
-
项目类别:
-
资助金额:$59.61万
-
财政年份:2016
-
负责人:Svati H. Shah
-
依托单位:
Metabolomic Quantitative Trait Locus (mQTL) Genetic Mapping in Human CVD
-
批准号:8150639
-
项目类别:
-
资助金额:$77.45万
-
财政年份:2009
-
负责人:Svati H. Shah
-
依托单位:
Metabolomic Quantitative Trait Locus (mQTL) Genetic Mapping in Human CVD
-
批准号:7894704
-
项目类别:
-
资助金额:$76.52万
-
财政年份:2009
-
负责人:Svati H. Shah
-
依托单位:
Metabolomic Quantitative Trait Locus (mQTL) Genetic Mapping in Human CVD
-
批准号:7636093
-
项目类别:
-
资助金额:$74.8万
-
财政年份:2009
-
负责人:Svati H. Shah
-
依托单位:
Metabolomic Quantitative Trait Locus (mQTL) Genetic Mapping in Human CVD
-
批准号:8318232
-
项目类别:
-
资助金额:$56.8万
-
财政年份:2009
-
负责人:Svati H. Shah
-
依托单位:
Project 3 - Shah
-
批准号:9277506
-
项目类别:
-
资助金额:$48.54万
-
财政年份:--
-
负责人:Svati H. Shah
-
依托单位:
Project 3 - Shah
-
批准号:9493527
-
项目类别:
-
资助金额:$49.56万
-
财政年份:--
-
负责人:Svati H. Shah
-
依托单位:
Project 3 - Shah
-
批准号:9072718
-
项目类别:
-
资助金额:$44.15万
-
财政年份:--
-
负责人:Svati H. Shah
-
依托单位:
海外基金