Genetics and pathobiology of ichthyosis en confetti
Genetics and pathobiology of ichthyosis en confetti
批准号:
8271255
负责人:
KEITH A CHOATE
金额:
$12.93万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2008
资助国家:
美国
项目状态:
已结题
起止时间:
2008-07-01 至 2013-05-31
关键词:
AccountingAffectAllelesAreaBiological AssayBiological ModelsBiopsyBreedingCalciumCandidate Disease GeneCellsChildhoodChromosomes, Human, Pair 17ClinicalDNADNA analysisDataDermatologyDevelopmentDiseaseDisease modelDominant-Negative MutationEpidermisEventFamilyFrequenciesFutureGene ExpressionGene Expression ProfileGene MutationGene TargetingGenerationsGenesGeneticGenetic ModelsGenetic RecombinationGenomicsGenotypeIchthyosesIchthyosis en confettiIn VitroIndividualIntermediate Filament ProteinsKnock-in MouseKnockout MiceLeukocytesLoss of HeterozygosityMapsMethodsMitotic RecombinationModelingMolecular GeneticsMosaicismMutationNaturePathologyPathway interactionsPatientsPhenotypePhysiciansProteinsRelative (related person)Research PersonnelRoleSamplingSegmental uniparental disomySingle Nucleotide PolymorphismSkinSpottingsTestingTherapeuticTherapeutic InterventionTrainingTransgenic ModelVariantWhite Spotsbasedensitydesignfitnessgain of functiongain of function mutationgene functiongenetic analysisgenome-widehuman diseasein vivo Modelinsightinterestinterstitialkeratinocytekeratinocyte differentiationkindredmouse modelmutantnovelnovel strategiesperipheral bloodprogramsrecombinational repairreproductiveresearch studyskin disordertooltool development
中文摘要
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英文摘要
DESCRIPTION (provided by applicant): The aim of this project is to identify the genetic mutations responsible for the development of scaly skin in the clinical subtypes of ichthyosis en confetti and to characterize the function of these genes in vitro and through the generation of mouse models. Ichthyosis en confetti is an apparently autosomal-dominant ichthyosis with three distinct clinical variants sharing a feature not seen in other ichthyoses or genodermatoses - the devel- opment of hundreds of areas of revertant, normal skin in childhood which increase in number and size over the course of a patient's lifetime. We have used this clinical finding to devise a novel approach to mapping the locus for type I ichthyosis en confetti, a disease which would otherwise have been unapproachable by traditional genetic analysis approaches due to impaired genetic fitness and a lack of extended kindreds. We predicted that ichthyosis en confetti is most likely to be caused by a heterozygous mutation and that the high frequency of reversion can only be accomplished by deletion or loss of the causative mutation, permitting mapping of the disease locus by identifying overlapping regions of loss of heterozygosity in single nucleotide polymorphism array analysis of DNA prepared from revertant white spots compared to DMA from patient- matched leukocyte-derived DNA. In such analysis, we have identified large overlapping deletions on a segment of chromosome 17 in 28 white spots from six patients with type I ichthyosis en confetti, and, in further studies, we have proven that the mechanism of genetic correction in the majority of these revertant spots is mitotic recombination. This is the first example of a human disease which achieves such widespread reversion via this pathway. We have identified an additional clinical variant of this disease and expect to identify an additional genetic locus. The genetic mutations responsible for the two types of ichthyosis en confetti will be identified by a positional candidate gene approach. In vitro and mouse models of this disease will be studied to identify the normal and mutant function of these genes in epidermal differentation, but, importantly, these may permit insight into mechanisms of revertant mosaicism in the skin which could have broad application to other diseases. This project is designed to provide training in moleclar genetics for the PI and to allow him to develop a carrer in acacdemic dermatology with a focus on the molecular genetics of heritable skin disease.
期刊论文(5)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1146/annurev-genet-121415-121955
发表时间:
2017-11-27
期刊:
Annual review of genetics
影响因子:
11.1
作者:
[Lim YH, Moscato Z, Choate KA]
通讯作者:
Choate KA
Somatic ATP2A2 mutation in a case of papular acantholytic dyskeratosis: mosaic Darier disease.
在丘疹性刺刺刺激性症障碍的情况下,体细胞ATP2A2突变:马赛克darier病。
DOI:
10.1111/cup.12551
发表时间:
2015-11
期刊:
Journal of cutaneous pathology
影响因子:
1.7
作者:
[Knopp EA, Saraceni C, Moss J, McNiff JM, Choate KA]
通讯作者:
Choate KA
DOI:
10.1126/science.1192280
发表时间:
2010-10-01
期刊:
Science (New York, N.Y.)
影响因子:
--
作者:
[Choate KA, Lu Y, Zhou J, Choi M, Elias PM, Farhi A, Nelson-Williams C, Crumrine D, Williams ML, Nopper AJ, Bree A, Milstone LM, Lifton RP]
通讯作者:
Lifton RP
Genetics and Pathobiology of Cutaneous Mosaic Disorders
-
批准号:10376195
-
项目类别:
-
资助金额:$55.53万
-
财政年份:2018
-
负责人:KEITH A CHOATE
-
依托单位:
Genetics and Pathobiology of Disorders of Keratinization
-
批准号:10211211
-
项目类别:
-
资助金额:$51.35万
-
财政年份:2015
-
负责人:KEITH A CHOATE
-
依托单位:
Genetics and Pathobiology of Disorders of Keratinization
-
批准号:8942911
-
项目类别:
-
资助金额:$49.82万
-
财政年份:2015
-
负责人:KEITH A CHOATE
-
依托单位:
Genetics and Pathobiology of Disorders of Keratinization
-
批准号:10614377
-
项目类别:
-
资助金额:$54.55万
-
财政年份:2015
-
负责人:KEITH A CHOATE
-
依托单位:
Genetics and Pathobiology of Disorders of Keratinization
-
批准号:10371176
-
项目类别:
-
资助金额:$52.29万
-
财政年份:2015
-
负责人:KEITH A CHOATE
-
依托单位:
Pediatric Dermatology Research Alliance Annual Conference
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批准号:8597492
-
项目类别:
-
资助金额:$5.96万
-
财政年份:2013
-
负责人:KEITH A CHOATE
-
依托单位:
Pediatric Dermatology Research Alliance Annual Conference
-
批准号:8723740
-
项目类别:
-
资助金额:$6.0万
-
财政年份:2013
-
负责人:KEITH A CHOATE
-
依托单位:
Mechanisms of Genetic Reversion in Ichthyosis With Confetti
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批准号:8703506
-
项目类别:
-
资助金额:$36.71万
-
财政年份:2011
-
负责人:KEITH A CHOATE
-
依托单位:
Mechanisms of Genetic Reversion in Ichthyosis With Confetti
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批准号:8332886
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项目类别:
-
资助金额:$37.37万
-
财政年份:2011
-
负责人:KEITH A CHOATE
-
依托单位:
Mechanisms of Genetic Reversion in Ichthyosis With Confetti
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批准号:8219845
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项目类别:
-
资助金额:$37.26万
-
财政年份:2011
-
负责人:KEITH A CHOATE
-
依托单位:
Mechanisms of Revertant Mosaicism in Ichthyosis with Confetti
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批准号:10335133
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项目类别:
-
资助金额:$51.17万
-
财政年份:2011
-
负责人:KEITH A CHOATE
-
依托单位:
Mechanisms of Revertant Mosaicism in Ichthyosis with Confetti
-
批准号:10557891
-
项目类别:
-
资助金额:$51.44万
-
财政年份:2011
-
负责人:KEITH A CHOATE
-
依托单位:
Mechanisms of Genetic Reversion in Ichthyosis With Confetti
-
批准号:8522261
-
项目类别:
-
资助金额:$35.59万
-
财政年份:2011
-
负责人:KEITH A CHOATE
-
依托单位:
Mechanisms of Revertant Mosaicism in Ichthyosis with Confetti
-
批准号:10092126
-
项目类别:
-
资助金额:$49.05万
-
财政年份:2011
-
负责人:KEITH A CHOATE
-
依托单位:
Genetics and pathobiology of ichthyosis en confetti
-
批准号:7858276
-
项目类别:
-
资助金额:$12.93万
-
财政年份:2008
-
负责人:KEITH A CHOATE
-
依托单位:
Genetics and pathobiology of ichthyosis en confetti
-
批准号:7513585
-
项目类别:
-
资助金额:$12.93万
-
财政年份:2008
-
负责人:KEITH A CHOATE
-
依托单位:
Genetics and pathobiology of ichthyosis en confetti
-
批准号:7645634
-
项目类别:
-
资助金额:$12.93万
-
财政年份:2008
-
负责人:KEITH A CHOATE
-
依托单位:
Genetics and pathobiology of ichthyosis en confetti
-
批准号:8080884
-
项目类别:
-
资助金额:$12.93万
-
财政年份:2008
-
负责人:KEITH A CHOATE
-
依托单位:
Training in Investigative Dermatology
-
批准号:10408132
-
项目类别:
-
资助金额:$39.97万
-
财政年份:1975
-
负责人:KEITH A CHOATE
-
依托单位:
Training in Investigative Dermatology
-
批准号:10206471
-
项目类别:
-
资助金额:$40.77万
-
财政年份:1975
-
负责人:KEITH A CHOATE
-
依托单位:
海外基金