Chromatin Accessibility and Regulatory Network Modulation by Endocrine Disrupters
Chromatin Accessibility and Regulatory Network Modulation by Endocrine Disrupters
批准号:
8583621
负责人:
JOHN A STAMATOYANNOPOULOS
金额:
$37.8万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2013
资助国家:
美国
项目状态:
已结题
起止时间:
2013-09-26 至 2017-05-31
关键词:
AddressAdultAffectArchitectureBindingBreastCell LineCellsChemical ExposureChemicalsChromatinComplexDNADataData SetDevelopmentDoseEndocrine DisruptorsEpigenetic ProcessEpithelial CellsEstrogensExcisionExhibitsExposure toFetal TissuesGene Expression ProfileGeneric DrugsGenomeGenomicsGoalsHistocompatibility TestingHormonesHuman GenomeHypersensitivityKnowledgeLifeLocationMalignant NeoplasmsMammary Gland ParenchymaMapsMeasurementMethodsModelingMolecularNatureNuclear Hormone ReceptorsNuclear ReceptorsNucleotidesOutcomePathologyPatternPhenotypePlayProcessProductionProliferatingProteinsProteomicsRegulatory ElementResolutionRiskRoleShapesSignal PathwaySiteSliceSystemTestingTimeTissuesToxic Environmental SubstancesToxinTranscriptTranscriptional Regulationbasehuman diseasehuman tissueinsightnovelpromoterpublic health relevancereceptor bindingresponsetissue culturetranscription factortranscriptome sequencingxenoestrogen
中文摘要
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英文摘要
DESCRIPTION (provided by applicant): Our current understanding of how endocrine-disrupting chemicals (EDCs), such as the hormone mimics ('xenoestrogens') modify and maintain chromatin states, gene expression patterns and alter genomic nuclear receptor binding and chromatin structural patterns is nascent. Chromatin accessibility plays a major role in shaping the binding landscape of nuclear hormone receptors and all transcription factors. DNaseI hypersensitivity mapping provides a powerful approach for global, generic, and precise delineation of regulatory DNA. In this proposal, we aim to apply these powerful approaches to map alterations in the regulatory DNA landscape associated with EDCs, and to define the impact of EDC exposure on transcriptional control networks. Focusing on xenoestrogens, we aim to characterize systematically the impact of exposure on the regulatory DNA landscape using model cell lines as well as specialized primary cell and primary human tissue culture systems. We will also address major outstanding questions concerning transient exposures to EDCs giving rise to lasting phenotypic effects, and analyze transcriptional regulatory networks perturbed by EDCs.
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会议论文
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批准号:10241208
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财政年份:2021
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依托单位:
ENCODE Mapping Center-A Comprehensive Catalog of DNase I Hypersensitive Sites
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批准号:9247732
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资助金额:$308.69万
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财政年份:2017
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负责人:JOHN A STAMATOYANNOPOULOS
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依托单位:
Chromatin Accessibility and Regulatory Network Modulation by Endocrine Disrupters
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批准号:9266194
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资助金额:$37.8万
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财政年份:2016
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财政年份:2015
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依托单位:
Center for Photogenomics
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批准号:9338283
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资助金额:$200.0万
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财政年份:2015
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Center for Photogenomics
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批准号:8883312
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资助金额:$200.0万
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财政年份:2015
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Illumina HiSeq 2500 Sequencer
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财政年份:2014
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依托单位:
Functional characterization of blood cell associated regulatory GWAS hits
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批准号:9230428
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财政年份:2014
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依托单位:
Functional characterization of blood cell associated regulatory GWAS hits
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批准号:8606650
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资助金额:$18.45万
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财政年份:2014
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依托单位:
High-resolution mapping of DNaseI hypersensitive regulatory DNA in GTEx samples
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High-resolution mapping of DNaseI hypersensitive regulatory DNA in GTEx samples
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批准号:9052200
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项目类别:
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资助金额:$45.0万
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财政年份:2014
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负责人:JOHN A STAMATOYANNOPOULOS
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依托单位:
High-resolution mapping of DNaseI hypersensitive regulatory DNA in GTEx samples
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财政年份:2014
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依托单位:
Chromatin Accessibility and Regulatory Network Modulation by Endocrine Disrupters
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批准号:8857464
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项目类别:
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资助金额:$37.8万
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财政年份:2013
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负责人:JOHN A STAMATOYANNOPOULOS
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依托单位:
Chromatin Accessibility and Regulatory Network Modulation by Endocrine Disrupters
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资助金额:$37.42万
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依托单位:
A Comprehensive Catalog of Dnasel Hypersensitive Sites
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A Comprehensive Catalog of Dnasel Hypersensitive Sites
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A Comprehensive Catalog of Dnasel Hypersensitive Sites
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资助金额:$10.0万
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依托单位:
A Comprehensive Catalog of Dnasel Hypersensitive Sites
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A Comprehensive Catalog of Dnasel Hypersensitive Sites
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依托单位:
海外基金