Femtosecond nano-crystallography of membrane proteins

膜蛋白的飞秒纳米晶体学

• 批准号: 9304242
• 负责人: PETRA FROMME
• 金额: $ 29.54万
• 依托单位: ARIZONA STATE UNIVERSITY-TEMPE CAMPUS
• 依托单位国家: 美国
• 财政年份: 2010
• 资助国家: 美国
• 起止时间: 2010-09-30 至 2019-05-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/9304242
• 关键词: Biological; Cells; Code; Communities; Complex; Crystallization; Crystallography; Data; Data Analyses; Data Set; Detection; Development; Drug Targeting; Elements; Evaluation; Funding; Generations; Genes; Goals; Grant; Growth; Health; Human; Hydration status; Injectable; Injection of therapeutic agent; Insecta; Investigation; Journals; Lasers; Legal patent; Lipids; Mediating; Medical; Membrane Proteins; Membrane Transport Proteins; Methods; Microfluidic Microchips; Microfluidics; Molecular; Nature; Paper; Pharmaceutical Preparations; Phase; Photosystem I; Physiologic pulse; Process; Proteins; Proteome; Publications; Publishing; Radiation induced damage; Reaction; Resolution; Roentgen Rays; Science; Shapes; Solid; Sorting - Cell Movement; Stream; Structural Biologist; Structure; Synchrotrons; Technology; Time; Work; X ray diffraction analysis; X-Ray Diffraction; base; cofactor; cytochrome c oxidase; design; direct application; free-electron laser; improved; in vivo; innovation; macromolecule; method development; movie; nano; nanocrystal; protein complex; protein structure; public health relevance; reconstruction; structural biology; technology development; x-ray free-electron laser

DESCRIPTION (provided by applicant): This project aims to further develop the method of femtosecond nanocrystallography for the structure determination of membrane proteins. 30% of the human proteome consist of membrane proteins, which control and mediate the interaction between cells, regulate transport in and out of the cells and are also the major players in bioenergy conversion. Their importance for human health is overwhelming, with 60% of all current drugs being targeted to membrane proteins. Femtosecond crystallography is a new method for X-ray structure analysis of biological macromolecules, where hundreds of thousands of X-ray diffraction snapshots are collected from a stream of fully hydrated nano/microcrystals of proteins, using femtosecond X-ray pulses from a Free Electron Laser. The peak flux of an X-ray FEL is 109 times higher than the flux from a 3rd generation Synchrotron. While the X-ray pulses are so strong that they destroy any solid material, X-ray diffraction occurs before the biomolecules are destroyed. New developments in nanocrystal growth and characterization, together with development of new injector technology and data evaluation methods have progressed the new method of SFX at a very fast pace based on results from this project which has led to 16 publications, 9 of them in Nature of Science journals and one patent (pending). The proposal is focused on four major aims which include the development of new methods for nanocrystal growth and characterization (aim 1), innovations on new crystal sorting and Injector technology (aim 2), further development of data analysis methods including de novo phasing of SFX data (aim 3) and determination of membrane protein structures with SFX and new avenues for time-resolved SFX (aim 4). The goal is to open a new era in Structural Biology, where SFX is developed and used to solve challenging membrane protein structures. The development of time resolved SFX will provide new milestones towards the final goal to determine molecular movies of membrane proteins in action.

描述（由申请人提供）：本项目旨在进一步开发用于膜蛋白结构测定的飞秒纳米微阵列法。30%的人类蛋白质组由膜蛋白组成，它们控制和介导细胞之间的相互作用，调节进出细胞的运输，也是生物能量转换的主要参与者。它们对人类健康的重要性是压倒性的，目前所有药物的60%都是针对膜蛋白的。飞秒晶体学是一种用于生物大分子X射线结构分析的新方法，其中使用来自自由电子激光器的飞秒X射线脉冲从蛋白质的完全水合纳米/微晶流中收集数十万个X射线衍射快照。X射线自由电子激光的峰值通量是第三代同步加速器的109倍。虽然X射线脉冲非常强，可以破坏任何固体材料，但X射线衍射发生在生物分子被破坏之前。基于该项目的结果，在晶体生长和表征方面的新发展，以及新的注射器技术和数据评估方法的发展，以非常快的速度推进了SFX的新方法，该项目已导致16篇出版物，其中9篇发表在《科学自然》杂志上，还有一项专利（正在申请中）。该提案集中于四个主要目标，包括开发新的晶体生长和表征方法（目标1），创新新的晶体分选和注射器技术（目标2），进一步开发数据分析方法，包括从头定相SFX数据（目标3）和用SFX确定膜蛋白结构以及时间分辨SFX的新途径（目标4）。我们的目标是开启结构生物学的新时代，SFX被开发并用于解决具有挑战性的膜蛋白结构。时间分辨SFX的发展将为确定膜蛋白分子电影的最终目标提供新的里程碑。