Illuminating the Druggable Genome Resource Dissemination and Outreach Center (IDG-RDOC)
Illuminating the Druggable Genome Resource Dissemination and Outreach Center (IDG-RDOC)
批准号:
10532379
负责人:
LARRY A. SKLAR
金额:
$50.0万
依托单位国家:
美国
项目类别:
财政年份:
2017
资助国家:
美国
项目状态:
已结题
起止时间:
2017-12-01 至 2024-11-30
关键词:
AdoptionBiocompatible MaterialsBiologicalBiological AssayBiological ModelsBiologyBiomedical EngineeringChemicalsCollaborationsCommunitiesCommunity OutreachDataData CollectionData ScienceData SetDevelopmentDiseaseDrug TargetingEcosystemEducation and OutreachExperimental ModelsFamilyFlow CytometryFoundationsFundingG-Protein-Coupled ReceptorsGenerationsGenomeGenomicsGuidelinesHumanHuman Genome ProjectInfrastructureInternationalInvestigationIon ChannelLaboratoriesMedicalMolecularMolecular BankMorphologic artifactsNew MexicoPharmaceutical ChemistryPharmaceutical PreparationsPhasePoliciesProcessProductionProtein KinaseProteinsProteomeProtocols documentationPublicationsQualifyingReagentReportingReproducibilityResearchResearch PersonnelResearch Project GrantsResolutionResource SharingResourcesServicesSpecific qualifier valueSystemTechnologyTeleconferencesTerminologyTrainingTraining ProgramsTraining and EducationUnited States National Institutes of HealthUniversitiesWorkclinical developmentdata exchangedata sharing networksdata standardsdrug discoveryexperiencegenome resourcegenome-wideinteroperabilitymeetingsmembermetadata standardsnovelnovel therapeuticsopen innovationoperationoutreachoutreach programpre-clinicalprogramsrepositoryscreeningsmall moleculesuccesstechnology developmenttooltraining opportunityweb based interfaceworking group
中文摘要
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英文摘要
PROJECT SUMMARY
As the Human Genome Project (HGP) approached its successful conclusion, NIH was in the process of
formulating the Roadmap, which evolved into the Common Fund. At the leading edge of these initiatives was
the Biomedical Engineering Research Partnership (BRP), which promoted technology development. For the
BRP, Sklar led the development of high throughput flow cytometry, a screening technology which transitioned
into the Molecular Libraries Program (MLP), a logical successor to the HGP, to develop small molecule probes
for newly discovered genomic targets. For the Common Fund, Illuminating the Druggable Genome (IDG)
became the next logical successor to prioritize genomic targets for further investigation. The technology
advanced via the BRP by Sklar became a foundation for the collaboration with Oprea resulting in 10 years of
participation in the MLP through both pilot and production phases, with Sklar leading both administrative and
laboratory efforts and Oprea leading the data science efforts. Toward the end of the MLP, Oprea, Sklar, and
Schürer, who had also been part of the MLP since the pilot phase, joined forces for the BARD initiative (2012-
14) and again in Phase I (2015-17) and this Phase II IDG proposal (2018-24).
Despite steady progress in developing novel therapeutics and their enormous medical and societal benefits,
current drugs target only a small fraction of the human proteome. Even drugs in clinical development and most
preclinical drug discovery research ignore a significant portion of the druggable proteome. Through the
development, broad dissemination, and use of community scientific resources, the IDG program is focused on
advancing research to study human proteins for which publicly available information or active research is
currently lacking, in order to catalyze the discovery of novel biology with a particular focus on understudied
members of the protein kinase, ion channel, and non-olfactory GPCR families.
Our highly-coordinated team from the University of New Mexico and the University of Miami will establish the
IDG Resource Dissemination and Outreach Center (RDOC) to facilitate widespread access to consortium-
generated data and resources as well as to serve the overall administration of the IDG Consortium and its
relationships with external partners. The IDG-RDOC will work with all IDG Consortium investigators to collect
and curate information regarding critical tools and reagents being developed by the IDG Consortium and
disseminate them through the IDG Portal. Specifically we will: (i) coordinate and support the IDG consortium
via a highly experienced administrative team; (ii) facilitate and coordinate external partnerships, outreach, and
training related to IDG program activities; and (iii) develop and implement data standards, policies, operations,
and tools to collect, curate, identify, and disseminate IDG-generated resources in accordance with (extended)
NIH FAIR (Findable, Accessible, Attributable, Interoperable, Reusable, Reproducible) principles.
1"
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DOI:
10.1039/d0cs01065k
发表时间:
2021-08-21
期刊:
Chemical Society reviews
影响因子:
46.2
作者:
[Muratov EN , Amaro R , Andrade CH , Brown N , Ekins S , Fourches D , Isayev O , Kozakov D , Medina-Franco JL , Merz KM , Oprea TI , Poroikov V , Schneider G , Todd MH , Varnek A , Winkler DA , Zakharov AV , Cherkasov A , Tropsha A ]
通讯作者:
Tropsha A
DOI:
10.1038/s41467-021-23165-1
发表时间:
2021-06-03
期刊:
Nature communications
影响因子:
16.6
作者:
[Cichońska A, Ravikumar B, Allaway RJ, Wan F, Park S, Isayev O, Li S, Mason M, Lamb A, Tanoli Z, Jeon M, Kim S, Popova M, Capuzzi S, Zeng J, Dang K, Koytiger G, Kang J, Wells CI, Willson TM, IDG-DREAM Drug-Kinase Binding Prediction Challenge Consortium, Oprea TI, Schlessinger A, Drewry DH, Stolovitzky G, Wennerberg K, Guinney J, Aittokallio T]
通讯作者:
Aittokallio T
DOI:
10.1038/s42003-022-03068-7
发表时间:
2022-02-11
期刊:
Communications biology
影响因子:
5.9
作者:
[Binder J, Ursu O, Bologa C, Jiang S, Maphis N, Dadras S, Chisholm D, Weick J, Myers O, Kumar P, Yang JJ, Bhaskar K, Oprea TI]
通讯作者:
Oprea TI
DOI:
10.1002/cpbi.92
发表时间:
2020-03
期刊:
Current protocols in bioinformatics
影响因子:
--
作者:
[Sheils T, Mathias SL, Siramshetty VB, Bocci G, Bologa CG, Yang JJ, Waller A, Southall N, Nguyen DT, Oprea TI]
通讯作者:
Oprea TI
AI-Assisted chemical probe discovery for the understudied Calcium-Calmodulin Dependent Kinase, PNCK.
DOI:
10.1371/journal.pcbi.1010263
发表时间:
2023-05
期刊:
PLoS computational biology
影响因子:
4.3
作者:
[]
通讯作者:
共 13 条
Autophagy Scientific Core
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批准号:10249118
-
项目类别:
-
资助金额:$23.99万
-
财政年份:2017
-
负责人:LARRY A. SKLAR
-
依托单位:
Illuminating the Druggable Genome Resource Dissemination and Outreach Center (IDG-RDOC)
-
批准号:10314062
-
项目类别:
-
资助金额:$50.0万
-
财政年份:2017
-
负责人:LARRY A. SKLAR
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依托单位:
NOVEL DNA DOUBLE STRAND BREAK REPAIR TARGETING THERAPEUTICS FOR CANCER TREATMENT
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批准号:8693254
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项目类别:
-
资助金额:$46.26万
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财政年份:2014
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负责人:LARRY A. SKLAR
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依托单位:
NOVEL DNA DOUBLE STRAND BREAK REPAIR TARGETING THERAPEUTICS FOR CANCER TREATMENT
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批准号:8827725
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项目类别:
-
资助金额:$36.12万
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财政年份:2014
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负责人:LARRY A. SKLAR
-
依托单位:
NOVEL DNA DOUBLE STRAND BREAK REPAIR TARGETING THERAPEUTICS FOR CANCER TREATMENT
-
批准号:9187077
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项目类别:
-
资助金额:$14.56万
-
财政年份:2014
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负责人:LARRY A. SKLAR
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依托单位:
University of New Mexico Center for Molecular Discovery
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批准号:8443190
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项目类别:
-
资助金额:$58.99万
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财政年份:2012
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负责人:LARRY A. SKLAR
-
依托单位:
Administration
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批准号:8443193
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项目类别:
-
资助金额:$9.83万
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财政年份:2012
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负责人:LARRY A. SKLAR
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依托单位:
HIGH THROUGHPUT, HIGH CONTENT MOLECULAR LIBRARIES SCREENING
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批准号:8361764
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项目类别:
-
资助金额:$2.24万
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财政年份:2011
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负责人:LARRY A. SKLAR
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依托单位:
LIGAND-RECEPTOR SYSTEMS
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批准号:8361739
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项目类别:
-
资助金额:$1.12万
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财政年份:2011
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负责人:LARRY A. SKLAR
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依托单位:
Administration
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批准号:8116588
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项目类别:
-
资助金额:$162.53万
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财政年份:2010
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负责人:LARRY A. SKLAR
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依托单位:
HIGH THROUGHPUT, HIGH CONTENT MOLECULAR LIBRARIES SCREENING
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批准号:8169400
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项目类别:
-
资助金额:$3.34万
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财政年份:2010
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负责人:LARRY A. SKLAR
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依托单位:
LIGAND-RECEPTOR SYSTEMS
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批准号:8169375
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项目类别:
-
资助金额:$1.67万
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财政年份:2010
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负责人:LARRY A. SKLAR
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依托单位:
LIGAND-RECEPTOR SYSTEMS
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批准号:7956755
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项目类别:
-
资助金额:$1.61万
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财政年份:2009
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负责人:LARRY A. SKLAR
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依托单位:
HIGH THROUGHPUT, HIGH CONTENT MOLECULAR LIBRARIES SCREENING
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批准号:7956782
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项目类别:
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资助金额:$3.22万
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财政年份:2009
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负责人:LARRY A. SKLAR
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依托单位:
LIGAND-RECEPTOR SYSTEMS
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批准号:7724229
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项目类别:
-
资助金额:$1.61万
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财政年份:2008
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负责人:LARRY A. SKLAR
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依托单位:
HIGH THROUGHPUT, HIGH CONTENT MOLECULAR LIBRARIES SCREENING
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批准号:7724258
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项目类别:
-
资助金额:$3.22万
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财政年份:2008
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负责人:LARRY A. SKLAR
-
依托单位:
Administration
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批准号:8344435
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项目类别:
-
资助金额:$92.9万
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财政年份:2008
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负责人:LARRY A. SKLAR
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依托单位:
University of New Mexico Center for Molecular Discovery
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批准号:8116592
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项目类别:
-
资助金额:$321.76万
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财政年份:2008
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负责人:LARRY A. SKLAR
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依托单位:
University of New Mexico Center for Molecular Discovery
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批准号:8704042
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项目类别:
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资助金额:$80.0万
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财政年份:2008
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负责人:LARRY A. SKLAR
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依托单位:
University of New Mexico Center for Molecular Discovery
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批准号:7680301
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项目类别:
-
资助金额:$351.22万
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财政年份:2008
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负责人:LARRY A. SKLAR
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依托单位:
海外基金