RESOURCE-BASED CENTER FOR THE ADVANCEMENT OF PRECISION MEDICINE IN RHEUMATOLOGY
RESOURCE-BASED CENTER FOR THE ADVANCEMENT OF PRECISION MEDICINE IN RHEUMATOLOGY
批准号:
10685559
负责人:
Mary C Nakamura
金额:
$80.74万
依托单位国家:
美国
项目类别:
财政年份:
2016
资助国家:
美国
项目状态:
未结题
起止时间:
2016-09-21 至 2026-08-31
关键词:
AccelerationAddressAreaAutomobile DrivingBioinformaticsBiologyCaliforniaCellsClinicalClinical DataClinical InformaticsClinical ResearchClinical TreatmentCollaborationsComputational BiologyConsultationsDataDatabasesDevelopmentDiagnosisDiagnosticDiseaseEducational workshopElectronic Health RecordEnsureEnvironmentEtiologyEvolutionFundingFutureGenomicsGoalsGrantHeterogeneityImmunologyImmunophenotypingIndividualInfrastructureInterdisciplinary StudyKnowledgeLeadershipMentorsMethodologyMethodsModalityMolecularPathway interactionsPatientsPopulationPrognosisQuality ControlRecording of previous eventsResearchResearch DesignResearch PersonnelResearch Project GrantsResourcesRheumatismRheumatologyRunningSamplingSan FranciscoScienceSelection for TreatmentsSeriesServicesTalentsTechnologyTrainingTranslational ResearchUniversitiesWorkaccurate diagnosisautoimmune rheumatologic diseaseclinical careclinical heterogeneityclinical phenotypecohortdata disseminationdata resourcedata sharingdesigndisorder subtypegenomic dataimprovedinnovationinterdisciplinary approachinterestmembermolecular phenotypemultiple omicsnew technologynext generationnovelnovel therapeuticsprecision medicineprogramsresearch studysingle cell sequencingsymposiumtranscriptomicstranslational scientisttreatment response
中文摘要
项目摘要/摘要
加州大学旧金山分校风湿病中心的精准医学中心Premier(P30)提供了至关重要的
资源和专业知识使尖端研究能够推进风湿病的精准医学
疾病。Premier汇集了临床专业知识、明确的患者队列、最先进的
与生物信息学和综合分析专家合作的免疫表型和基因组技术。这
基础设施促进协作研究,可集成大量临床和分子数据
需要对推动临床表型异质性的生物学有更基本的了解
以及风湿病患者的治疗反应。总理寻求降低门槛
通过提供对相关资源的访问以及使用这些资源的专业知识来从事风湿学研究
恰如其分。
我们的中心包括三个资源核心,每个资源核心将提供咨询,以指导研究人员进行研究
设计、分析并获得形成所需协作所需的重要专业知识和协助。这个
临床数据和信息学核心(CDI),由吉努斯·亚兹达尼博士指导,将提供临床研究和
信息学服务,包括访问大型风湿病数据库、生物检疫和
用于研究发现的电子健康记录数据;基因组技术核心(GT),由Dr.
吉米·叶和沃尔特·埃卡尔巴将开发新的基因组技术并建立专门的工作流程
和为风湿病研究设计的分析路径;以及综合生物信息学核心
(IB),由Marina Sirota博士和Gabriela Fragiadakis博士共同执导,将解决高级
生物信息学专业知识,特别是在单细胞分析、多组学综合分析和使用方面
公开可用的数据。总理行政核心由Mary Nakamura博士(主任)和Dr Nakamura博士领导。
吉努斯·亚兹达尼(协理主任),并向中心提供领导和组织监督。这个
CORE包括一个重要的丰富计划,包括研讨会、年度研讨会、由
资源核心、指导计划和赠款计划,包括开发和可行性试点赠款
和核心使用拨款。Premier利用大量重要的加州大学旧金山分校和分部资源,这些资源
与Premier资源核心提供的服务高度协同。
鉴于我们的过往记录和对创新的坚定承诺,Premier准备吸引新的
研究人员和风湿病研究进一步推进,朝着改善的最终目标前进
通过对基础疾病的详细阐述来诊断和治疗风湿病
机械装置。
英文摘要
PROJECT SUMMARY/ABSTRACT
PREMIER, the UCSF Precision Medicine in Rheumatology Center (P30), provides critically important
resources and expertise to enable cutting-edge research to advance precision medicine in the rheumatic
diseases. PREMIER brings together clinical expertise, defined patient cohorts, state-of-the-art
immunophenotyping and genomic technologies with experts in bioinformatics and integrative analyses. This
infrastructure facilitates collaborative studies that can integrate the large amounts of clinical and molecular data
needed to gain a more fundamental understanding of the biology driving the heterogeneity of clinical phenotypes
and treatment responses among individuals with rheumatic disease. PREMIER seeks to lower the barriers to
pursuing rheumatology research by providing access to relevant resources along with the expertise to use them
appropriately.
Our Center includes three Resource Cores that will each provide consultation to guide investigators in study
design, analysis, and access to significant expertise and assistance in forming the collaborations needed. The
Clinical Data and Informatics Core (CDI), directed by Dr. Jinoos Yazdany, will provide clinical research and
informatics services including access to large rheumatic diseases databases, biospecimens and curation of
electronic health record data for research discovery; the Genomic Technology Core (GT), co-directed by Drs.
Jimmie Ye and Walter Eckalbar, will develop novel genomic technologies and institute specialized workflows
and analytic pathways designed for the study of rheumatic diseases; and the Integrative Bioinformatics Core
(IB), co-directed by Drs. Marina Sirota and Gabriela Fragiadakis, will address investigator needs for advanced
bioinformatics expertise, particularly with regard to single cell analytics, multi-omic integrative analysis, and use
of publicly available data. PREMIER’s Administrative Core is led by Dr. Mary Nakamura (Director) and Dr.
Jinoos Yazdany (Associate Director) and provides leadership and organizational oversight to the Center. The
Core includes a significant enrichment program involving seminars, an annual symposium, workshops led by the
Resource Cores, a mentoring program, and a grant program including Development and Feasibility Pilot grants
and Core Usage Grants. PREMIER leverages a number of significant UCSF and divisional resources that are
highly synergistic with the services offered in PREMIER Resource Cores.
Given our track record and deep commitment to innovation, PREMIER is poised to attract new
investigators and further advance rheumatology research towards the ultimate goal of improving
diagnosis and treatment of rheumatic disease through the detailed elucidation of underlying disease
mechanisms.
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DOI:
10.1002/acr.25039
发表时间:
2023-01
期刊:
ARTHRITIS CARE & RESEARCH
影响因子:
4.7
作者:
[Ugarte-Gil, Manuel F., Alarcon, Graciela S., Seet, Andrea M., Izadi, Zara, Montgomery, Anna D., Duarte-Garcia, Ali, Gilbert, Emily L., Valenzuela-Almada, Maria O., Wise, Leanna, Sparks, Jeffrey A., Hsu, Tiffany Y. -T., D'Silva, Kristin M., Patel, Naomi J., Sirotich, Emily, Liew, Jean W., Hausmann, Jonathan S., Sufka, Paul, Grainger, Rebecca, Bhana, Suleman, Wallace, Zachary, Jacobsohn, Lindsay, Strangfeld, Anja, Mateus, Elsa F., Hyrich, Kimme L., Gossec, Laure, Carmona, Loreto, Lawson-Tovey, Saskia, Kearsley-Fleet, Lianne, Schaefer, Martin, Machado, Pedro M., Robinson, Philip C., Gianfrancesco, Milena, Yazdany, Jinoos]
通讯作者:
Yazdany, Jinoos
DOI:
10.1001/jamanetworkopen.2021.29639
发表时间:
2021-10-01
期刊:
JAMA network open
影响因子:
13.8
作者:
[Izadi Z, Brenner EJ, Mahil SK, Dand N, Yiu ZZN, Yates M, Ungaro RC, Zhang X, Agrawal M, Colombel JF, Gianfrancesco MA, Hyrich KL, Strangfeld A, Carmona L, Mateus EF, Lawson-Tovey S, Klingberg E, Cuomo G, Caprioli M, Cruz-Machado AR, Mazeda Pereira AC, Hasseli R, Pfeil A, Lorenz HM, Hoyer BF, Trupin L, Rush S, Katz P, Schmajuk G, Jacobsohn L, Seet AM, Al Emadi S, Wise L, Gilbert EL, Duarte-García A, Valenzuela-Almada MO, Isnardi CA, Quintana R, Soriano ER, Hsu TY, D'Silva KM, Sparks JA, Patel NJ, Xavier RM, Marques CDL, Kakehasi AM, Flipo RM, Claudepierre P, Cantagrel A, Goupille P, Wallace ZS, Bhana S, Costello W, Grainger R, Hausmann JS, Liew JW, Sirotich E, Sufka P, Robinson PC, Machado PM, Griffiths CEM, Barker JN, Smith CH, Yazdany J, Kappelman MD, Psoriasis Patient Registry for Outcomes, Therapy and Epidemiology of COVID-19 Infection (PsoProtect); the Secure Epidemiology of Coronavirus Under Research Exclusion for Inflammatory Bowel Disease (SECURE-IBD); and the COVID-19 Global Rheumatology Allianc, Psoriasis Patient Registry for Outcomes, Therapy and Epidemiology of COVID-19 Infection (PsoProtect); the Secure Epidemiology of Coronavirus Under Research Exclusion for Inflammatory Bowel Disease (SECURE-IBD); and the COVID-19 Global Rheumatology Alliance (GRA)]
通讯作者:
Psoriasis Patient Registry for Outcomes, Therapy and Epidemiology of COVID-19 Infection (PsoProtect); the Secure Epidemiology of Coronavirus Under Research Exclusion for Inflammatory Bowel Disease (SECURE-IBD); and the COVID-19 Global Rheumatology Alliance (GRA)
DOI:
10.1016/j.berh.2021.101665
发表时间:
2021-03
期刊:
Best practice & research. Clinical rheumatology
影响因子:
--
作者:
[Taylor T, Yazdany J, Gianfrancesco MA]
通讯作者:
Gianfrancesco MA
DOI:
10.1136/lupus-2018-000278
发表时间:
2018
期刊:
Lupus science & medicine
影响因子:
3.9
作者:
[Jackman RP, Cruz GI, Nititham J, Triulzi DJ, Barcellos LF, Criswell LA, Norris PJ, Busch MP]
通讯作者:
Busch MP
Personalizing routine lab tests with machine learning.
通过机器学习个性化常规实验室测试。
DOI:
10.1038/s41591-021-01486-4
发表时间:
2021
期刊:
Nature medicine
影响因子:
82.9
作者:
[Tang,Alice, Oskotsky,Tomiko, Sirota,Marina]
通讯作者:
Sirota,Marina
共 25 条
RESOURCE-BASED CENTER FOR THE ADVANCEMENT OF PRECISION MEDICINE IN RHEUMATOLOGY
-
批准号:10469673
-
项目类别:
-
资助金额:$80.74万
-
财政年份:2016
-
负责人:Mary C Nakamura
-
依托单位:
Administrative Core
-
批准号:10469674
-
项目类别:
-
资助金额:$23.1万
-
财政年份:2016
-
负责人:Mary C Nakamura
-
依托单位:
Administrative Core
-
批准号:10281471
-
项目类别:
-
资助金额:$23.1万
-
财政年份:2016
-
负责人:Mary C Nakamura
-
依托单位:
RESOURCE-BASED CENTER FOR THE ADVANCEMENT OF PRECISION MEDICINE IN RHEUMATOLOGY
-
批准号:10281470
-
项目类别:
-
资助金额:$80.74万
-
财政年份:2016
-
负责人:Mary C Nakamura
-
依托单位:
Administrative Core
-
批准号:10685560
-
项目类别:
-
资助金额:$23.1万
-
财政年份:2016
-
负责人:Mary C Nakamura
-
依托单位:
Resource-based Center for the Advancement of Precision Medicine in Rheumatology
-
批准号:10007596
-
项目类别:
-
资助金额:$72.17万
-
财政年份:2016
-
负责人:Mary C Nakamura
-
依托单位:
DAP12 and ITAM-signals in Osteoclastogenesis
-
批准号:8397538
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2009
-
负责人:Mary C Nakamura
-
依托单位:
DAP12 and ITAM-signals in Osteoclastogenesis
-
批准号:7797802
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2009
-
负责人:Mary C Nakamura
-
依托单位:
DAP12 and ITAM-signals in Osteoclastogenesis
-
批准号:8195894
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2009
-
负责人:Mary C Nakamura
-
依托单位:
DAP12 and ITAM-signals in Osteoclastogenesis
-
批准号:7906050
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2009
-
负责人:Mary C Nakamura
-
依托单位:
Using VEGF expression in inflammatory arthritis to induce targeted apoptosis
-
批准号:7667470
-
项目类别:
-
资助金额:$19.29万
-
财政年份:2008
-
负责人:Mary C Nakamura
-
依托单位:
Using VEGF expression in inflammatory arthritis to induce targeted apoptosis
-
批准号:7509772
-
项目类别:
-
资助金额:$17.09万
-
财政年份:2008
-
负责人:Mary C Nakamura
-
依托单位:
DAP-12 ASSOCIATED RECEPTORS IN OSTEOCLASTS
-
批准号:6819863
-
项目类别:
-
资助金额:$30.03万
-
财政年份:2004
-
负责人:Mary C Nakamura
-
依托单位:
DAP-12 ASSOCIATED RECEPTORS IN OSTEOCLASTS
-
批准号:7281156
-
项目类别:
-
资助金额:$28.47万
-
财政年份:2004
-
负责人:Mary C Nakamura
-
依托单位:
DAP-12 ASSOCIATED RECEPTORS IN OSTEOCLASTS
-
批准号:7476480
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项目类别:
-
资助金额:$27.9万
-
财政年份:2004
-
负责人:Mary C Nakamura
-
依托单位:
DAP-12 ASSOCIATED RECEPTORS IN OSTEOCLASTS
-
批准号:7114316
-
项目类别:
-
资助金额:$29.32万
-
财政年份:2004
-
负责人:Mary C Nakamura
-
依托单位:
DAP-12 ASSOCIATED RECEPTORS IN OSTEOCLASTS
-
批准号:6929003
-
项目类别:
-
资助金额:$30.03万
-
财政年份:2004
-
负责人:Mary C Nakamura
-
依托单位:
LIGANDS FOR NKR P1--A RECEPTOR ON NATURAL KILLER CELLS
-
批准号:2077491
-
项目类别:
-
资助金额:$7.61万
-
财政年份:1994
-
负责人:Mary C Nakamura
-
依托单位:
LIGANDS FOR NKR P1--A RECEPTOR ON NATURAL KILLER CELLS
-
批准号:2732785
-
项目类别:
-
资助金额:$8.91万
-
财政年份:1994
-
负责人:Mary C Nakamura
-
依托单位:
LIGANDS FOR NKR P1--A RECEPTOR ON NATURAL KILLER CELLS
-
批准号:2077492
-
项目类别:
-
资助金额:$7.67万
-
财政年份:1994
-
负责人:Mary C Nakamura
-
依托单位:
海外基金