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Enhanced Echinobase: A Community Genomics Research Resource For The Future

Enhanced Echinobase: A Community Genomics Research Resource For The Future
增强型 Echinobase:未来的社区基因组学研究资源
批准号:
10715578
负责人:
CHARLES A. ETTENSOHN
金额:
$78.69万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2023
资助国家:
美国
项目状态:
未结题
起止时间:
2023-09-22 至 2028-06-30

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中文摘要
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英文摘要
SUMMARY OF OVERALL COMPONENT Enhanced Echinobase: A Community Genomics Research Resource for the Future Echinobase (Echinobase.org) is the central repository and web-accessible resource for all of the diverse genomic data types produced by biologists working with echinoderms. Echinobase was cloned from Xenbase to enhance database functionality, web application capabilities, and performance, all at a fraction of the cost of doing this independently. A key added feature developed through this work are database modules that support curation and searches of gene expression data. The look and feel of Echinobase is unique, and is tailored to its user base including the creation of a multi-species viewer. The website provides rapid integrated capabilities for search, view and download of a range of datatypes to empower their own research. Echinoderms are one of only three major phyla within the deuterostomes, and therefore the species within this clade encompass a large taxonomic diversity of body plans. Species of echinoderms are powerful model systems for understanding the processes by which the genome controls development. The strengths of this experimental model will continue to make it a preeminent system for the analysis of the genomic control of embryogenesis and for analyses of developmental gene regulatory networks (GRNs) to reveal the mechanistic links between the genome and development and consequently the genomic basis of congenital diseases.
期刊论文(7)
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DOI: 10.1186/s13227-023-00219-7
发表时间: 2023-12-20
期刊: EvoDevo
影响因子: 4.1
作者: []
通讯作者:
DOI: 10.1016/j.ygeno.2022.110431
发表时间: 2022-07
期刊: GENOMICS
影响因子: 4.4
作者: [Foley, Saoirse, Vlasova, Anna, Marcet-Houben, Marina, Gabaldon, Toni, Hinman, Veronica F.]
通讯作者: Hinman, Veronica F.
DOI: 10.1093/database/baab052
发表时间: 2021-08-07
期刊: Database : the journal of biological databases and curation
影响因子: --
作者: [Beatman TR, Buckley KM, Cary GA, Hinman VF, Ettensohn CA]
通讯作者: Ettensohn CA
DOI: 10.1093/database/baab030
发表时间: 2021-05-19
期刊: Database : the journal of biological databases and curation
影响因子: --
作者: [Foley S, Ku C, Arshinoff B, Lotay V, Karimi K, Vize PD, Hinman V]
通讯作者: Hinman V
Mining Information from Echinoderm Genomes and the Scientific Literature
  • 批准号:
    10715580
  • 项目类别:
  • 资助金额:
    $14.94万
  • 财政年份:
    2023
  • 负责人:
    CHARLES A. ETTENSOHN
  • 依托单位:
Mining the Scientific Literature and Building a Pan-Echinoderm Gene Expression Database
  • 批准号:
    10241292
  • 项目类别:
  • 资助金额:
    $12.05万
  • 财政年份:
    2018
  • 负责人:
    CHARLES A. ETTENSOHN
  • 依托单位:
Enhanced Echinobase: A Community Genome Resource for the Future
  • 批准号:
    10241290
  • 项目类别:
  • 资助金额:
    $52.49万
  • 财政年份:
    2018
  • 负责人:
    CHARLES A. ETTENSOHN
  • 依托单位:
Enhanced Echinobase: A Community Genome Resource for the Future
  • 批准号:
    10442594
  • 项目类别:
  • 资助金额:
    $53.83万
  • 财政年份:
    2018
  • 负责人:
    CHARLES A. ETTENSOHN
  • 依托单位:
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