Interdisciplinary Training in Genome Sciences
Interdisciplinary Training in Genome Sciences
批准号:
10700873
负责人:
Bruce Colston Trapnell
金额:
$79.17万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
1995
资助国家:
美国
项目状态:
未结题
起止时间:
1995-08-01 至 2025-08-31
中文摘要
摘要
英文摘要
ABSTRACT
We request funds to continue the interdisciplinary training program in genomics at the University of
Washington and affiliated institutions. The program focuses on preparing pre- and postdoctoral trainees for
a research career in genomics and computational biology with an emphasis on translational research.
Trainees will engage in projects that include discovering how a genome encodes the information for RNAs,
proteins and its own structure and replication; measuring and analyzing sequence variation; developing
technologies for high-throughput experimental assays including-next generation sequencing; and
generating computational tools to analyze genomic variants and their impact on mRNA and protein function.
As these research challenges demand interdisciplinary approaches and multidisciplinary collaborations, one
goal of this program is to attract individuals trained in computer science, statistics, physics, and engineering
to biological research. Another goal is to train cellular and molecular biologists to incorporate genomic-
based quantitative analyses in their research to allow them to effectively collaborate at this interdisciplinary
interface. Given the wide diversity in educational backgrounds and career goals among our trainees, the
program emphasizes highly individualized training programs and interdisciplinary research. A
multidisciplinary group of 51 faculty, selected for their involvement in genome analysis and their strong
record of collaborative interactions, comprises the training team. Research experience is complemented
with a variety of didactic courses and electives. The trainees are also exposed to discussions on ethical
research conduct and the ethical, legal, and social implications of genomic research. Breadth of knowledge
and program cohesion are achieved through trainee participation in two seminar series that feature genomic
research and computational biology, journal clubs, and research reports. In the coming five years, we will
continue to expand our program in genomics, proteomics, instrumentation development, computational
biology, and statistical genomics. We request funds to train 12 predoctoral and 4 postdoctoral fellows per
year. The trainees will emerge with the skills necessary for success in the academic and biomedical
research environment of the 21st century made possible by advances in genomics.
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Convex clustering: an attractive alternative to hierarchical clustering.
凸聚类:层次聚类的有吸引力的替代品。
DOI:
10.1371/journal.pcbi.1004228
发表时间:
2015-05
期刊:
PLoS computational biology
影响因子:
4.3
作者:
[Chen GK, Chi EC, Ranola JM, Lange K]
通讯作者:
Lange K
DOI:
10.1242/dev.117010
发表时间:
2015-09-15
期刊:
Development (Cambridge, England)
影响因子:
--
作者:
[Palpant NJ, Pabon L, Roberts M, Hadland B, Jones D, Jones C, Moon RT, Ruzzo WL, Bernstein I, Zheng Y, Murry CE]
通讯作者:
Murry CE
DOI:
10.1101/gr.144659.112
发表时间:
2013-04
期刊:
Genome research
影响因子:
7
作者:
[Liachko I, Youngblood RA, Keich U, Dunham MJ]
通讯作者:
Dunham MJ
Population stratification of a common APOBEC gene deletion polymorphism.
普通APOBEC基因缺失多态性的种群分层。
DOI:
10.1371/journal.pgen.0030063
发表时间:
2007-04-20
期刊:
PLOS GENETICS
影响因子:
4.5
作者:
[Kidd, Jeffrey M., Newman, Tera L., Tuzun, Eray, Kaul, Rajinder, Eichler, Evan E.]
通讯作者:
Eichler, Evan E.
DOI:
10.1038/s41586-022-04701-5
发表时间:
2022-05
期刊:
Nature
影响因子:
64.8
作者:
[]
通讯作者:
共 152 条
Charting the regulatory topography of the cell differentiation landscape with single-cell RNA-Seq.
-
批准号:8952190
-
项目类别:
-
资助金额:$231.75万
-
财政年份:2015
-
负责人:Bruce Colston Trapnell
-
依托单位:
Pulmonary Macrophage Transplantation for Pulmonary Alveolar Proteinosis
-
批准号:10213109
-
项目类别:
-
资助金额:$45.97万
-
财政年份:2014
-
负责人:Bruce Colston Trapnell
-
依托单位:
Pulmonary Macrophage Transplantation for Pulmonary Alveolar Proteinosis
-
批准号:9982374
-
项目类别:
-
资助金额:$45.97万
-
财政年份:2014
-
负责人:Bruce Colston Trapnell
-
依托单位:
Interdisciplinary Training in Genome Sciences
-
批准号:10473880
-
项目类别:
-
资助金额:$88.8万
-
财政年份:1995
-
负责人:Bruce Colston Trapnell
-
依托单位:
海外基金