A mechanism of lysosomal Calcium entry
A mechanism of lysosomal Calcium entry
批准号:
10020204
负责人:
Yamuna Krishnan
金额:
$22.41万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-09-30 至 2022-08-31
关键词:
ATP phosphohydrolaseAffectAffinityAlanineAmino AcidsAnimalsBioinformaticsBiologicalBiological AssayBrainCa(2+)-Transporting ATPaseCalciumCell physiologyCellsCytosolDNADataDefectDiseaseDyesEndoplasmic ReticulumFamily memberFunctional disorderHomology ModelingHumanImageIn SituIonsKineticsKnowledgeLaboratoriesLeadLocationLysosomesMammalian CellMapsMeasuresMediatingMethodsModelingMolecularMonitorMutationNerve DegenerationNeurodegenerative DisordersNeuronal Ceroid-LipofuscinosisOrganellesParkinson DiseaseParkinsonian DisordersPathogenicityPhotobleachingPositioning AttributeProtein ImportReporterResearchRisk FactorsSpastic ParaplegiaSpecificityStructural ModelsStructureStructure-Activity RelationshipTechnologyTherapeuticTimeVariantanalogbasecell typeinsightmembermutantnervous system disordernovelpredictive modelingprototypereal-time imagesrisk variantsmall moleculestemsuccesstheoriestherapeutic target
中文摘要
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英文摘要
Lysosomes are highly acidic organelles that integrate important cellular processes in all cell types.
There is a preponderance of risk genes for neurological disorders associated with lysosome dysfunction.
In the lysosome, lumenal Ca2+ is critical to function, and defects in every known lysosomal Ca2+ release
channel leads to a distinct neurological disorder. Yet, dysregulated lysosomal Ca2+ can also arise due to
defective import. While much more known of mechanisms that release lysosomal Ca2+, there is a paucity
of information on the pathophysiology of Ca2+ import. Notably, the only known lysosomal Ca2+ importer in
animals, the P-type ATPase ATP13A2, was recently discovered by my laboratory using newly developed
reporter technology for lysosomal Ca2+ imaging. This importer was previously identified as a major risk
gene for Parkinson's disease. Thus, a structural level understanding of how by ATP13A2 imports Ca2+ into
the lysosome is highly significant.
The premise of this proposal is that ATP13A2 function is mechanistically similar to that of SERCA but
with lower affinity and/or efficiency of Ca2+ transport. This premise is based on unpublished data from my
laboratory using homology modeling, which predicts very high similarity between ATP13A2 and SERCA.
SERCA (Sarco/Endoplasmic Reticulum Ca2+ ATPase) is one of the best studied P2-type ATPases. In
contrast, ATP13A2 is a P5-type ATPase, an ATPase sub-class yet to be mechanistically characterized.
The steps outlined in this proposal will identify and study the molecular mechanism of how ATP13A2
drives lysosomal Ca2+ import by mapping lysosomal Ca2+ dynamics in real-time in live mammalian cells.
We plan to create and characterize a photostable lysosomal Ca2+ reporter and develop an assay to map
the kinetics of lysosomal Ca2+ import in situ in live cells. Preliminary data shows that we have identified the
relevant molecular components to make this photostable organellar Ca2+ reporter. Further, an initial
bioinformatics analysis and homology modeling has revealed a remarkable similarly between ATP13A2
and SERCA. This will allow us to pinpoint residues important to Ca2+ import by a P5-type ATPase. By
expressing various ATP13A2 mutants and using real-time Ca2+ mapping, we shall be able to identify
residues critical to the function of ATP13A2.
Successful completion of this research will identify how a major risk gene for Parkinson's disease
imports lysosomal Ca2+ and elucidate the first structure-activity relationship in P5-type ATPases. Also, by
providing the first practical technology to quantitatively map lysosomal Ca2+ fluxes in live cells (in real-time),
we will be in a position to study new lysosomal Ca2+ importers and existing lysosome Ca2+ release channels
connected to various neurodegenerative diseases.
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会议论文
Predoctoral Training Program in Chemistry and Biology
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批准号:10641675
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项目类别:
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Mechanism and function of intracellular sodium-proton exchangers
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Intracellular Electrophysiology: An electrochemical atlas of organelles
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资助金额:$114.8万
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负责人:Yamuna Krishnan
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依托单位:
Mechanisms that alter Potassium channel trafficking in arrhythmias
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批准号:10676958
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项目类别:
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资助金额:$19.91万
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负责人:Yamuna Krishnan
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依托单位:
Mechanism and function of intracellular sodium-proton exchangers
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批准号:10797218
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项目类别:
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资助金额:$9.6万
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财政年份:2022
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负责人:Yamuna Krishnan
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依托单位:
Predoctoral Training Program in Chemistry and Biology
-
批准号:10334217
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项目类别:
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资助金额:$31.22万
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依托单位:
Calcium homeostasis in organelles
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批准号:10202773
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项目类别:
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资助金额:$36.04万
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财政年份:2020
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负责人:Yamuna Krishnan
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依托单位:
Calcium homeostasis in organelles
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批准号:10631101
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项目类别:
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资助金额:$36.04万
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财政年份:2020
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负责人:Yamuna Krishnan
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依托单位:
Calcium homeostasis in organelles
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批准号:10034342
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项目类别:
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资助金额:$36.04万
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财政年份:2020
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负责人:Yamuna Krishnan
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依托单位:
Calcium homeostasis in organelles
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项目类别:
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资助金额:$36.04万
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财政年份:2020
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负责人:Yamuna Krishnan
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依托单位:
海外基金