Studying HIV gp120 Glycosylation with Mass Spectrometry

利用质谱法研究 HIV gp120 糖基化

• 批准号: 7849929
• 负责人: ERIC B MONROE
• 金额: $ 5.05万
• 依托单位: UNIVERSITY OF ALABAMA AT BIRMINGHAM
• 依托单位国家: 美国
• 财政年份: 2009
• 资助国家: 美国
• 起止时间: 2009-04-06 至 2012-04-05
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7849929
• 关键词: Amino Acids; Binding; Biological; Cells; Chemicals; Complement; Databases; Future; Glycoproteins; HIV; HIV Envelope Protein gp120; HIV-1; Immune; Individual; Interdisciplinary Study; Life; Location; Mass Spectrum Analysis; Methods; Molecular Cloning; Mutation; Nature; Pattern; Pharmaceutical Preparations; Play; Polysaccharides; Preparation; Probability; Process; Proteins; Protocols documentation; Relative (related person); Research; Research Training; Resolution; Role; Site; Structure; Viral; Virion; Virus; comparative; glycosylation; immunogenic; insight; transmission process; virus culture

DESCRIPTION (provided by applicant): The focus of this interdisciplinary research-training proposal is the analysis of HIV envelope glycoprotein (gp120) glycosylation. This protein is highly glycosylated (22-25 putative glycosylation sites depending on strain) and binds to CD4 on host cells to initiate viral entry. As with many glycosylated proteins, a variety of different polysaccharides are attached to the protein's Asn residues. Although this process is enzymatic in nature, proteins are not necessarily homogenously glycosylated such that individual sites may contain a wide array of glycan moieties. By studying the similarities and differences between gp120 from live virus cultures derived from infective molecular clones of transmitted HIV, we aim to tease apart the relative importance of the glycosylation pattern of gp120 and its relationship with immunological avoidance, structural folding and infectivity. Although much is known regarding the importance of individual glycosylation sites through previous selective mutation studies in regard to immune avoidance and infectivty, the analysis of specific glycosylation patterns (identifying each glycan and its location on the protein) has been difficult to study. However, recent advances in mass spectrometric methods to study glycans provide a means to study the chemical nature of the specific glycans bound to specific amino acids in the proteins. The proposed research will adapt these glycomic and glycoproteomic methods to the study of the highly glycosylated gp120 protein from HIV. Specifically, we will study the glycosylation patterns of HIV gp120 with mass spectrometry to identify homogenously and heterogeneously glycosylated sites and the complement of glycan structures present at each individual glycosylation site. In addition, we aim to compare glycan incorporation into gp120 from viruses from infectious molecular clones produced from viruses obtained from transmitted viruses as a means to study conserved glycosylation patterns across transmitted HIV strains. An understanding of both the highly variable and highly conserved aspects of glycosylation may provide insight into the role of gp120 glycosylation at specific locations on the protein. While highly heterogeneously glycosylated sites may be associated with immune avoidance, sites that consistently contain the a single or chemical similar glycan moieties may suggest sites for future study as drug or immunological targets.

描述（由申请人提供）：这项跨学科研究培训计划的重点是HIV包膜糖蛋白（gp120）糖基化的分析。该蛋白高度糖基化（22-25个假定的糖基化位点取决于菌株），并与宿主细胞上的CD4结合以启动病毒进入。与许多糖基化蛋白质一样，各种不同的多糖附着在蛋白质的Asn残基上。虽然这个过程本质上是酶促的，但蛋白质并不一定均匀地糖基化，因此单个位点可能包含广泛的聚糖部分。通过研究来自传染性HIV分子克隆的活病毒培养物gp120的异同，我们旨在梳理gp120糖基化模式的相对重要性及其与免疫回避、结构折叠和传染性的关系。