Technical 2

技术2

• 批准号: 9000313
• 负责人: PETER D VIZE
• 金额: $ 19.52万
• 依托单位: CINCINNATI CHILDRENS HOSP MED CTR
• 依托单位国家: 美国
• 资助国家: 美国
• 起止时间: 至
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/9000313
• 关键词: Alternative Splicing; Code; Communities; Computer software; DNA; Databases; Development; Development Plans; Feedback; Genome; Goals; Grant; Graph; Imagery; Literature; Machine Learning; Maintenance; Modification; Phenotype; Proteins; RNA; Research Infrastructure; Resources; Surveys; Technology; Testing; Training; Untranslated RNA; Work; Xenopus; base; document outlines; experience; gene interaction; genome browser; genome editing; improved; meetings; model organisms databases; new technology; technology development; tool; web app

Summary Tech-2 Technology Development -2 describes the new features that we need to add to Xenbase in order to achieve our overall goals. Xenbase has a long list of essential additions and upgrades to be performed. This prioritized list was developed through feedback from the External Advisory Board (EAB), the Xenopus PI meeting and user surveys. These projects will require work at multiple levels of our software stack, from database modifications, web application development and user interfaces, to upgrades, maintenance, testing, bug fixing. Our experienced development team will continue to seek input from other MODs leveraging solutions that have working in other Resources. Our specific aims are: Aim 1 - Deploy JBrowse and WebApollo Aim 2 - Develop Support Vector Machine tools Aim 3 - Build support for new content types including robust graph display and visualization tools, protein-protein and gene interaction content, Non-coding RNAs and alternative splicing support and genome editing support.

摘要Tech-2 技术开发-2描述了我们需要添加到Xenbase的新功能 为了实现我们的总体目标。 Xenbase有很多要执行的基本添加和升级列表。这 优先列表是通过外部顾问委员会（EAB）的反馈来开发的 Xenopus PI会议和用户调查。这些项目需要多个工作 我们的软件堆栈的级别，来自数据库修改，Web应用程序开发 和用户界面，以升级，维护，测试，错误修复。我们经验丰富的 开发团队将继续寻求其他mod的意见，以利用解决方案 在其他资源中工作。我们的具体目的是： AIM 1-部署Jbrowse和WebApollo AIM 2-开发支持向量机床 AIM 3-建立对新内容类型的支持，包括可靠的图形显示和 可视化工具，蛋白质 - 蛋白质和基因相互作用含量，非编码RNA和 替代剪接支持和基因组编辑支持。