CIFters: Object Oriented Tools for Manipulating Crystallographic Information Files (CIF)
CIFters: Object Oriented Tools for Manipulating Crystallographic Information Files (CIF)
批准号:
9310154
负责人:
Philip Bourne
金额:
$39.19万
依托单位:
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
1993
资助国家:
美国
项目状态:
已结题
起止时间:
1993-09-01 至 1996-08-31
中文摘要
9310154 Bourne大分子结晶界最近通过了一套标准的数据定义,作为小分子结晶学已经衍生的子集的扩展,称为晶体信息文件(CIF)。大分子CIF定义将促进更简单的信息交换和丰富的受控词汇的高度期望的特征,供科学家在世界范围内扩展的学科中使用。快速采用CIF需要灵活、可互操作和可移植的软件工具。调查人员将建立一个类库和一套基于面向对象软件技术的工具,用于浏览、编辑、显示、查询、验证和格式化CIF文件,称为CIFter。此外,CIFters将可以从现有的大分子结晶学常用程序中调用,从而方便了对CIF文件的访问,进一步促进了CIF的使用。这个项目的长期目标是开发可扩展的软件工具,这些工具广泛适用于结构生物学社区。此外,该奖项还支持最终用户研讨会,以开始努力设计适当的CIFter。***
英文摘要
9310154 Bourne The macromolecular crystallography community has recently adopted a standard set of data definitions as extension to that subset already derived for small molecule crystallography and referred to as the Crystallographic Information File (CIF). Macromolecular CIF definitions will facilitate the highly desireable features of simpler information exchange and a rich controlled vocabulary for use world-wide by scientists in an expanding discipline. Speedy adoption of CIF requires flexible, interoperable, and portable software tools. The investigators will build a class library and a set of tools based on the object-oriented software technology to browse, edit, display, query, verify and format CIF files, called CIFters. In addition, CIFters will be callable from existing programs in common use in macromolecular crystallography facilitating access to CIF files, further promoting the use of CIF. The long term goal of this project is to develop extensible software tools which are widely available to the structural biology community. In addition, this award support an end-user workshop to begin the effort to design the appropriate CIFters. ***
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会议论文
Conceptualization and Analysis of a 3D Virtual Cell
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批准号:1216893
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项目类别:Standard Grant
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资助金额:$62.58万
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财政年份:2012
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负责人:Philip Bourne
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依托单位:
SGER: SciTube.tv: Video Delivery of Papers Published in PLoS Journals
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批准号:0732706
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项目类别:Standard Grant
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资助金额:$0.0万
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财政年份:2007
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负责人:Philip Bourne
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依托单位:
CyberBridge
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批准号:0737714
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项目类别:Continuing Grant
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资助金额:$119.56万
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财政年份:2007
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负责人:Philip Bourne
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依托单位:
ISMB Conference Support for Students & Young Scientists
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批准号:0620405
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项目类别:Standard Grant
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资助金额:$4.0万
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财政年份:2006
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负责人:Philip Bourne
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依托单位:
BioLit: Open Source Tools for Integrating Biological Literature and Databases
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批准号:0544575
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项目类别:Continuing Grant
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资助金额:$95.35万
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财政年份:2006
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负责人:Philip Bourne
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依托单位:
ISMB Conference on June 25-29, 2005 in Detroit, Michigan. Support for Students & Young Scientists
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批准号:0505980
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项目类别:Standard Grant
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资助金额:$3.0万
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财政年份:2005
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负责人:Philip Bourne
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依托单位:
ISMB 2004 Conference Support for Students and Young Scientists, to be held in Glasgow, Scotland July 2004.
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批准号:0440678
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项目类别:Standard Grant
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资助金额:$5.52万
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财政年份:2004
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负责人:Philip Bourne
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依托单位:
A Public Database Linking Protein Structure and Sequence Mutation Data
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批准号:0111710
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项目类别:Continuing Grant
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资助金额:$54.27万
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财政年份:2001
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负责人:Philip Bourne
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依托单位:
VOLTAGE-GATED ION CHANNEL PROTEIN RESOURCE DATABASE
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批准号:0111709
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项目类别:Standard Grant
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资助金额:$24.0万
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财政年份:2001
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负责人:Philip Bourne
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依托单位:
A Public Database Resource for Apoptosis Research and Education
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批准号:0078731
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项目类别:Continuing Grant
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资助金额:$51.88万
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财政年份:2000
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负责人:Philip Bourne
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依托单位:
Molecular Interactive Collaborative Environment (MICE)
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批准号:9723475
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项目类别:Standard Grant
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资助金额:$45.01万
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财政年份:1997
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负责人:Philip Bourne
-
依托单位:
A Portable Client-Server Data Management System for the Comparative Analysis of Proteins
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批准号:9630339
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项目类别:Standard Grant
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资助金额:$42.44万
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财政年份:1996
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负责人:Philip Bourne
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依托单位:
International Summer School on Macromolecular Crystallographic Computing being held at Western Washington University in Bellingham, WA., August 16-22, 1996
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批准号:9529557
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项目类别:Standard Grant
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资助金额:$0.5万
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财政年份:1996
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负责人:Philip Bourne
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依托单位:
Continued Development of a Software Framework to Maintain and Query Features of Biological Macromolecules
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批准号:9507625
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项目类别:Standard Grant
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资助金额:$14.1万
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财政年份:1995
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负责人:Philip Bourne
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依托单位:
An Object-Oriented Toolbox for Use with the Protein Data Bank (PDB)
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批准号:9116798
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项目类别:Continuing Grant
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资助金额:$114.68万
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财政年份:1992
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负责人:Philip Bourne
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依托单位:
海外基金