Integration of chromosome maps of allogamous diploid red clover.
Integration of chromosome maps of allogamous diploid red clover.
批准号:
20580006
负责人:
OHMIDO Nobuko
金额:
$2.5万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2008
资助国家:
日本
项目状态:
已结题
起止时间:
2008 至 2010
中文摘要
红三叶(Trifolium pratense L.)是一种饲用豆科牧草,为异交二倍体(2n=2x=14),基因组大小为440Mb。用26S和5S rDNA探针、细菌人工染色体(BAC)克隆和染色体图像分析系统(CHIAS4)对7条前中期染色体进行了荧光原位杂交(FISH)鉴定。14个BAC克隆分别与4、2、6、5、1、7和3号染色体远端杂交,分别位于每个连锁群的两端,代表为LG1-7。以CHIAS4为基础,构建定量习惯图,对FISH定位的染色体图像进行定量分析。这是我国第一份完整的红三叶染色体图谱,整合了遗传连锁图谱和数量染色体图谱,为研究豆科植物的遗传数据和深入研究提供了有价值的信息。本研究为豆科牧草品种的DNA标记和分子育种提供了重要数据。
英文摘要
Red clover (Trifolium pratense L.) is a forage legume, an allogamous diploid (2n=2x=14) with 440Mb genome size. Seven prometaphase chromosomes were identified by fluorescence in situ hybridization (FISH) using 26S and 5S rDNA probes and bacterial artificial chromosome (BAC) clones and chromosome image analysis system ver.4.0 (CHIAS4). 14 BAC clones located close to the both end of each linkage group (LG), representatively LG1-7, exclusively hybridized to the distal regions of Chromosome 4, 2, 6, 5, 1, 7 and 3, respectively. Chromosomes images of FISH mapping were quantitatively analyzed based on CHIAS4 and construct of quantitative idiogram. This is the first complete chromosome map of red clover and integration of the genetic linkage maps and the quantitative chromosome maps provides valuable information on the genetic data and insight into the legumes genetics. This study should contribute to provide significant data for DNA markers and molecular breeding in legume varieties.
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DOI:
10.1093/dnares/dsn008
发表时间:
2008-08
期刊:
DNA research : an international journal for rapid publication of reports on genes and genomes
影响因子:
--
作者:
[Sato S, Nakamura Y, Kaneko T, Asamizu E, Kato T, Nakao M, Sasamoto S, Watanabe A, Ono A, Kawashima K, Fujishiro T, Katoh M, Kohara M, Kishida Y, Minami C, Nakayama S, Nakazaki N, Shimizu Y, Shinpo S, Takahashi C, Wada T, Yamada M, Ohmido N, Hayashi M, Fukui K, Baba T, Nakamichi T, Mori H, Tabata S]
通讯作者:
Tabata S
High-resolution FISH for gene mapping and molecular analysis of plant chromosomes.
用于植物染色体基因定位和分子分析的高分辨率 FISH。
DOI:
--
发表时间:
2008
期刊:
影响因子:
--
作者:
[]
通讯作者:
Nuclear organization analyzed by visualization.
通过可视化分析核组织。
DOI:
--
发表时间:
2008
期刊:
The Nucleus 50
影响因子:
--
作者:
[Ohmido N, Wako T, Fukui K.]
通讯作者:
Fukui K.
DOI:
10.1093/dnares/dsq030
发表时间:
2011-02
期刊:
DNA research : an international journal for rapid publication of reports on genes and genomes
影响因子:
--
作者:
[Sato S, Hirakawa H, Isobe S, Fukai E, Watanabe A, Kato M, Kawashima K, Minami C, Muraki A, Nakazaki N, Takahashi C, Nakayama S, Kishida Y, Kohara M, Yamada M, Tsuruoka H, Sasamoto S, Tabata S, Aizu T, Toyoda A, Shin-i T, Minakuchi Y, Kohara Y, Fujiyama A, Tsuchimoto S, Kajiyama S, Makigano E, Ohmido N, Shibagaki N, Cartagena JA, Wada N, Kohinata T, Atefeh A, Yuasa S, Matsunaga S, Fukui K]
通讯作者:
Fukui K
Comprehensive chromosome map of red clover (Trifolium pratense L. ).
红三叶草(Trifolium pratense L.)的综合染色体图谱。
DOI:
--
发表时间:
2008
期刊:
影响因子:
--
作者:
[Kataoka R, Hara M, Kato S, Isobe S, Sato S, Tabata S, Ohmido N.]
通讯作者:
Ohmido N.
共 19 条
Integration of chromosome mand linkage maps of Lotus japonicus, Miyakogusa as a model plant of legume
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批准号:16580003
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$1.86万
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财政年份:2004
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负责人:OHMIDO Nobuko
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依托单位:
海外基金